RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 WNT1P04628 370 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 VEGFAP15692 232 aaPredicted RBP4.83□□□□□ -1.64
ITGB1-216ENST00000493758 GRK5P34947 590 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 CPA2P48052 419 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 MCM2P49736 904 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 AP2B1P63010 937 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 BTBD16Q32M84 506 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 C1orf228Q6PIY5 440 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 DHRS13Q6UX07 377 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.83□□□□□ -1.64
ITGB1-216ENST00000493758 ARL14EPQ8N8R7 260 aaPredicted RBP4.83□□□□□ -1.64
ITGB1-216ENST00000493758 NRACQ8N912 160 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 SLC44A5Q8NCS7 719 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 POF1BQ8WVV4 589 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 ZNF347Q96SE7 839 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 MPHOSPH6Q99547 160 aaKnown RBP4.83□□□□□ -1.64
ITGB1-216ENST00000493758 CCDC134Q9H6E4 229 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 SEMA4BQ9NPR2 832 aaPredicted RBP4.83□□□□□ -1.64
ITGB1-216ENST00000493758 DACT1Q9NYF0 836 aa4.83□□□□□ -1.64
ITGB1-216ENST00000493758 TRPC5Q9UL62 973 aaPredicted RBP4.83□□□□□ -1.64
ITGB1-216ENST00000493758 COPG1Q9Y678 874 aaKnown RBP4.83□□□□□ -1.64
ITGB1-216ENST00000493758 KCNAB3O43448 404 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 IGKV2-30P06310 120 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 FGF2P09038 288 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 DLGAP5Q15398 846 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 MIDNQ504T8 468 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 ASPHD1Q5U4P2 390 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 ANKRD40Q6AI12 368 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 TTLL5Q6EMB2 1281 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 DGAT2L7PQ6IED9 249 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 ENDOVQ8N8Q3 282 aaKnown RBP4.82□□□□□ -1.64
ITGB1-216ENST00000493758 ENAHQ8N8S7 591 aaPredicted RBP4.82□□□□□ -1.64
ITGB1-216ENST00000493758 OTUD7AQ8TE49 926 aaPredicted RBP4.82□□□□□ -1.64
ITGB1-216ENST00000493758 WDR83Q9BRX9 315 aaKnown RBP4.82□□□□□ -1.64
ITGB1-216ENST00000493758 ABHD14AQ9BUJ0 271 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 MECRQ9BV79 373 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 SLC22A11Q9NSA0 550 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 ZBTB40Q9NUA8 1239 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 PCDHA12Q9UN75 941 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 DAAM1Q9Y4D1 1078 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 HS3ST3B1Q9Y662 390 aa4.82□□□□□ -1.64
ITGB1-216ENST00000493758 ZNF814B7Z6K7 855 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 MCIDASD6RGH6 385 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 TRIM38O00635 465 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 TULP3O75386 442 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 TNFRSF1BP20333 461 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 ME1P48163 572 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 ADPRHP54922 357 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 MDGA2Q7Z553 956 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 DDIASQ8IXT1 998 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 MMP21Q8N119 569 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 CPT1BQ92523 772 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 MSI2Q96DH6 328 aaKnown RBP4.81□□□□□ -1.64
ITGB1-216ENST00000493758 TMEM120AQ9BXJ8 343 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 MAGEH1Q9H213 219 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 THSD1Q9NS62 852 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 MSRB1Q9NZV6 116 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 NDUFAF4Q9P032 175 aa4.81□□□□□ -1.64
ITGB1-216ENST00000493758 IPO11Q9UI26 975 aaKnown RBP4.81□□□□□ -1.64
ITGB1-216ENST00000493758 TBC1D3DA0A087WVF3 549 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 TBC1D3IA0A087WXS9 549 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 TBC1D3EA0A087X179 549 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 TBC1D3KA0A087X1G2 549 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 TBC1D3BA6NDS4 549 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 FAM90A10PA6NDY2 464 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 TBC1D3FA6NER0 549 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-216ENST00000493758 KCNJ18B7U540 433 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 TBC1D3LB9A6J9 549 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 F5H423 210 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-216ENST00000493758 ATG13O75143 517 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 HEXIM1O94992 359 aaKnown RBP4.8□□□□□ -1.64
ITGB1-216ENST00000493758 OAZ2O95190 189 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 BMP15O95972 392 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 LCKP06239 509 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 ALDOCP09972 364 aaKnown RBP4.8□□□□□ -1.64
ITGB1-216ENST00000493758 TBC1D3HP0C7X1 549 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 CST5P28325 142 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-216ENST00000493758 ZNF569Q5MCW4 686 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 PIK3CD-AS1Q5SR53 167 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 TBC1D3GQ6DHY5 549 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 TBC1D3CQ6IPX1 549 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 ERAP2Q6P179 960 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 KLHL17Q6TDP4 642 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 TBC1D3Q8IZP1 549 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-216ENST00000493758 ATG16L2Q8NAA4 619 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 C9orf106Q8NAJ2 232 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 HMGB4Q8WW32 186 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 SCNM1Q9BWG6 230 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 ABHD16BQ9H3Z7 469 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 IL21RQ9HBE5 538 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 RAB21Q9UL25 225 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 SLC12A4Q9UP95 1085 aa4.8□□□□□ -1.64
ITGB1-216ENST00000493758 HNRNPRO43390 633 aaKnown RBP4.79□□□□□ -1.64
ITGB1-216ENST00000493758 EPN2O95208 641 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 TBXAS1P24557 533 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-216ENST00000493758 STAT1P42224 750 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 ALDH7A1P49419 539 aaKnown RBP4.79□□□□□ -1.64
ITGB1-216ENST00000493758 SHC2P98077 582 aa4.79□□□□□ -1.64
ITGB1-216ENST00000493758 CHAF1AQ13111 956 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-216ENST00000493758 MAPK7Q13164 816 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms