RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 TAF12Q16514 161 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 FAM110CQ1W6H9 321 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 ZNF484Q5JVG2 852 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 DHRS13Q6UX07 377 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 FSIP1Q8NA03 581 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 ZNF398Q8TD17 642 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 KTI12Q96EK9 354 aaPredicted RBP6.52□□□□□ -1.37
SMG7-208ENST00000493609 FCRL5Q96RD9 977 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 SH2D3AQ9BRG2 576 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 ABHD14AQ9BUJ0 271 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 HTATIP2Q9BUP3 242 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 HERC2P3Q9BVR0 1158 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 SFXN1Q9H9B4 322 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 RIC8AQ9NPQ8 531 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 PDGFCQ9NRA1 345 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 DERAQ9Y315 318 aa6.52□□□□□ -1.37
SMG7-208ENST00000493609 GRM8O00222 908 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 RBMXL2O75526 392 aaKnown RBP6.51□□□□□ -1.37
SMG7-208ENST00000493609 RNF8O76064 485 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 CHN1P15882 459 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 ST6GAL1P15907 406 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 TACR3P29371 465 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 MPGP29372 298 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 CDK18Q07002 472 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 ANXA2RQ3ZCQ2 193 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 HSP90AB4PQ58FF6 505 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 CEP78Q5JTW2 689 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 TMEM88Q6PEY1 159 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 ZNF813Q6ZN06 617 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 PTF1AQ7RTS3 328 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 RHPN2Q8IUC4 686 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 CPOQ8IVL8 374 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 LINS1Q8NG48 757 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 OSR1Q8TAX0 266 aaPredicted RBP6.51□□□□□ -1.37
SMG7-208ENST00000493609 MAP4K1Q92918 833 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 TMLHEQ9NVH6 421 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 MTMR4Q9NYA4 1195 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 MAFFQ9ULX9 164 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 DNAJC16Q9Y2G8 782 aa6.51□□□□□ -1.37
SMG7-208ENST00000493609 RRP7AQ9Y3A4 280 aaKnown RBP6.51□□□□□ -1.37
SMG7-208ENST00000493609 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.5□□□□□ -1.37
SMG7-208ENST00000493609 HNRNPRO43390 633 aaKnown RBP6.5□□□□□ -1.37
SMG7-208ENST00000493609 LATS1O95835 1130 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 PYGLP06737 847 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 CSF1P09603 554 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 LYL1P12980 280 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 ACP5P13686 325 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 CNTFP26441 200 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 SLC10A2Q12908 348 aaPredicted RBP6.5□□□□□ -1.37
SMG7-208ENST00000493609 MTA1Q13330 715 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 SLC12A1Q13621 1099 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 ZNF268Q14587 947 aaPredicted RBP6.5□□□□□ -1.37
SMG7-208ENST00000493609 SMN1Q16637 294 aaKnown RBP6.5□□□□□ -1.37
SMG7-208ENST00000493609 GLE1Q53GS7 698 aaKnown RBP6.5□□□□□ -1.37
SMG7-208ENST00000493609 PTGR2Q8N8N7 351 aaPredicted RBP6.5□□□□□ -1.37
SMG7-208ENST00000493609 ADPRHL1Q8NDY3 354 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 DDB2Q92466 427 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 PIGKQ92643 395 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 KCNJ9Q92806 393 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 P2RY11Q96G91 374 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 RBM17Q96I25 401 aaKnown RBP6.5□□□□□ -1.37
SMG7-208ENST00000493609 ZNF347Q96SE7 839 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 CLPBQ9H078 707 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMG7-208ENST00000493609 KLHL13Q9P2N7 655 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 SPATA31A5Q5VU36 1347 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 SPATA31A7Q8IWB4 1347 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 WDR17Q8IZU2 1322 aa6.5□□□□□ -1.37
SMG7-208ENST00000493609 RRN3P2A6NIE6 340 aa6.49□□□□□ -1.37
SMG7-208ENST00000493609 SEPT4O43236 478 aa6.49□□□□□ -1.37
SMG7-208ENST00000493609 PLAUP00749 431 aa6.49□□□□□ -1.37
SMG7-208ENST00000493609 POLBP06746 335 aa6.49□□□□□ -1.37
SMG7-208ENST00000493609 HOXA7P31268 230 aaPredicted RBP6.49□□□□□ -1.37
SMG7-208ENST00000493609 SOX2P48431 317 aa6.49□□□□□ -1.37
SMG7-208ENST00000493609 MCM2P49736 904 aa6.49□□□□□ -1.37
SMG7-208ENST00000493609 B4GALNT1Q00973 533 aa6.49□□□□□ -1.37
SMG7-208ENST00000493609 RBM44Q6ZP01 1051 aaKnown RBP6.49□□□□□ -1.37
SMG7-208ENST00000493609 DNAJC10Q8IXB1 793 aa6.49□□□□□ -1.37
SMG7-208ENST00000493609 EXD3Q8N9H8 876 aa6.49□□□□□ -1.37
SMG7-208ENST00000493609 NPAS1Q99742 590 aa6.49□□□□□ -1.37
SMG7-208ENST00000493609 HDHD5Q9BXW7 423 aa6.49□□□□□ -1.37
SMG7-208ENST00000493609 ADARB2Q9NS39 739 aaKnown RBP6.49□□□□□ -1.37
SMG7-208ENST00000493609 GGA3Q9NZ52 723 aa6.49□□□□□ -1.37
SMG7-208ENST00000493609 SMARCA4P51532 1647 aa6.49□□□□□ -1.37
SMG7-208ENST00000493609 LMTK3Q96Q04 1460 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 SLC22A23A1A5C7 686 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 INPPL1O15357 1258 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 NCAM2O15394 837 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 TGM2P21980 687 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 PRPH2P23942 346 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 NANOS3P60323 173 aaKnown RBP6.48□□□□□ -1.37
SMG7-208ENST00000493609 EFR3AQ14156 821 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 MIS18BP1Q6P0N0 1132 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 ZNF474Q6S9Z5 364 aaPredicted RBP6.48□□□□□ -1.37
SMG7-208ENST00000493609 LRRTM4Q86VH4 590 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 UEVLDQ8IX04 471 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 NTN5Q8WTR8 489 aaPredicted RBP6.48□□□□□ -1.37
SMG7-208ENST00000493609 HERVK_113Q902F9 699 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 ATP2A3Q93084 1043 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 EVI5LQ96CN4 794 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms