RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ENDOD1O94919 500 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 LUC7L3O95232 432 aaKnown RBP8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 CYP1A2P05177 515 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 RHOCP08134 193 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 CHRNB1P11230 501 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 TFE3P19532 575 aaPredicted RBP8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 HOXD9P28356 352 aaPredicted RBP8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 SLC6A4P31645 630 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 ADRA1BP35368 520 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 CXCL12P48061 93 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 ATXN1P54253 815 aaKnown RBP8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 CDH4P55283 916 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 RPS24P62847 133 aaKnown RBP8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 SLC12A1Q13621 1099 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 CCINQ13939 588 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 KRT81Q14533 505 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 STARD3Q14849 445 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 EIF4HQ15056 248 aaKnown RBP8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 IFI16Q16666 785 aaKnown RBP8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 FNDC3BQ53EP0 1204 aaKnown RBP8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 PPP1R15BQ5SWA1 713 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 C6orf118Q5T5N4 469 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 ERMARDQ5T6L9 678 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 NADSYN1Q6IA69 706 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 FBXL22Q6P050 247 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 CHST9Q7L1S5 443 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 C12orf40Q86WS4 652 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 C1orf210Q8IVY1 113 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 CHPFQ8IZ52 775 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 SPEM1Q8N4L4 309 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 TMEM105Q8N8V8 129 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 KCNV2Q8TDN2 545 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 CENPIQ92674 756 aaPredicted RBP8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 NTAN1Q96AB6 310 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 CLDN23Q96B33 292 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 TBC1D31Q96DN5 1066 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 ZYG11BQ9C0D3 744 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 KCNH6Q9H252 994 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 CHRDQ9H2X0 955 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 CATSPERBQ9H7T0 1116 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 ZWILCHQ9H900 591 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 POLMQ9NP87 494 aaPredicted RBP8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 RBM12Q9NTZ6 932 aaKnown RBP8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 ABCB8Q9NUT2 735 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 BCCIPQ9P287 314 aaKnown RBP eCLIP8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 OR12D3Q9UGF7 316 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 PCSK1NQ9UHG2 260 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 SLC25A13Q9UJS0 675 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 GGA2Q9UJY4 613 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 HPCAL4Q9UM19 191 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 SLC27A6Q9Y2P4 619 aa8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 EPN1Q9Y6I3 576 aaPredicted RBP8.39□□□□□ -1.07
TM4SF1-204ENST00000493348 TCRBV5S1A1TA0A578 114 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 SOWAHDA6NJG2 315 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 TMEM110-MUSTN1A8MSY1 372 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 EIF3CLB5ME19 914 aaKnown RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 EEF2KO00418 725 aaKnown RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 NDUFA10O95299 355 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 KLF8O95600 359 aaPredicted RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 ASLP04424 464 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 PABPC1P11940 636 aaKnown RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 OR1E1P30953 314 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 HTR7P34969 479 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 PCK1P35558 622 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 GJC1P36383 396 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 ETFBP38117 255 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 GGCXP38435 758 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 ARL4AP40617 200 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 ARHGAP25P42331 645 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 ZNF135P52742 658 aaPredicted RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 PTPN5P54829 565 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 HDAC4P56524 1084 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 TPI1P60174 286 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 CSTF1Q05048 431 aaKnown RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 SULT2A1Q06520 285 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 MTAPQ13126 283 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 DMC1Q14565 340 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 MESDQ14696 234 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 ASTE1Q2TB18 679 aaPredicted RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 BOLA3Q53S33 107 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 PPP6R3Q5H9R7 873 aaPredicted RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 SH3PXD2AQ5TCZ1 1133 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 ZC3H14Q6PJT7 736 aaKnown RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 MAP7D3Q8IWC1 876 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 ETFBKMTQ8IXQ9 262 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 CCAR2Q8N163 923 aaKnown RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 PGBD3Q8N328 593 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 FIBINQ8TAL6 211 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 RFFLQ8WZ73 363 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 CALR3Q96L12 384 aaKnown RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 EIF3CQ99613 913 aaKnown RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 OSBPL2Q9H1P3 480 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 DHX35Q9H5Z1 703 aaKnown RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 RETREG1Q9H6L5 497 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 C11orf16Q9NQ32 467 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 ELOVL2Q9NXB9 296 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 XPO7Q9UIA9 1087 aaKnown RBP8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 VPS28Q9UK41 221 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 FZD10Q9ULW2 581 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 USP18Q9UMW8 372 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms