RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 CHADO15335 359 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 DAPK3O43293 454 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 NARSO43776 548 aaKnown RBP17.74■□□□□ 0.43
LIME1-208ENST00000493265 TBL1XO60907 577 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 NFATC1O95644 943 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 CD48P09326 243 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 CTNNA1P35221 906 aaKnown RBP17.74■□□□□ 0.43
LIME1-208ENST00000493265 IRAK1P51617 712 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 TPI1P60174 286 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 RPS24P62847 133 aaKnown RBP17.74■□□□□ 0.43
LIME1-208ENST00000493265 LLGL1Q15334 1064 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 MEI1Q5TIA1 1274 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 LRRC38Q5VT99 294 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 ASCL5Q7RTU5 278 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 POLNQ7Z5Q5 900 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 CCDC50Q8IVM0 306 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 ADGRG2Q8IZP9 1017 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 UBL4BQ8N7F7 174 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 RAPGEF5Q92565 580 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 IRF7Q92985 503 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 ATP2A3Q93084 1043 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 NXPE3Q969Y0 559 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 TMA16Q96EY4 203 aaKnown RBP17.74■□□□□ 0.43
LIME1-208ENST00000493265 C1orf74Q96LT6 269 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 PRICKLE1Q96MT3 831 aaPredicted RBP17.74■□□□□ 0.43
LIME1-208ENST00000493265 PSMB7Q99436 277 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 FAM83CQ9BQN1 747 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 BBS2Q9BXC9 721 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 PCDH18Q9HCL0 1135 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 HPS4Q9NQG7 708 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 DDX56Q9NY93 547 aaKnown RBP17.74■□□□□ 0.43
LIME1-208ENST00000493265 GTSE1Q9NYZ3 720 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 MPP6Q9NZW5 540 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 STOML2Q9UJZ1 356 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 PCDHA3Q9Y5H8 950 aa17.74■□□□□ 0.43
LIME1-208ENST00000493265 CCDC66A2RUB6 948 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 MIF4GDA9UHW6 222 aaKnown RBP17.73■□□□□ 0.43
LIME1-208ENST00000493265 EEF2KO00418 725 aaKnown RBP17.73■□□□□ 0.43
LIME1-208ENST00000493265 LRIG2O94898 1065 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 CYBBP04839 570 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 CYP17A1P05093 508 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 GOT1P17174 413 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 MSNP26038 577 aaKnown RBP17.73■□□□□ 0.43
LIME1-208ENST00000493265 CTNNA2P26232 953 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 ARL4AP40617 200 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 MMRN1Q13201 1228 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 DHCR24Q15392 516 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 RPS6KA1Q15418 735 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 RABGAP1LQ5R372 815 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 ASTLQ6HA08 431 aaPredicted RBP17.73■□□□□ 0.43
LIME1-208ENST00000493265 RHBDF2Q6PJF5 856 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 ZSCAN30Q86W11 494 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 PSTKQ8IV42 348 aaKnown RBP17.73■□□□□ 0.43
LIME1-208ENST00000493265 FAM217AQ8IXS0 508 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 CPXM2Q8N436 756 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 CPA6Q8N4T0 437 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 NAT16Q8N8M0 369 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 HJURPQ8NCD3 748 aaPredicted RBP17.73■□□□□ 0.43
LIME1-208ENST00000493265 CSGALNACT1Q8TDX6 532 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 ALG3Q92685 438 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 TBC1D31Q96DN5 1066 aa17.73■□□□□ 0.43
LIME1-208ENST00000493265 DMDP11532 3685 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 TYW5A2RUC4 315 aaKnown RBP17.72■□□□□ 0.43
LIME1-208ENST00000493265 H3BRJ5 948 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 DDX3YO15523 660 aaKnown RBP17.72■□□□□ 0.43
LIME1-208ENST00000493265 CNTN5O94779 1100 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 ADH1CP00326 375 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 ADH5P11766 374 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 KDELR1P24390 212 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 EPHB2P29323 1055 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 RWDD2BP57060 319 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 ZNF211Q13398 564 aaPredicted RBP17.72■□□□□ 0.43
LIME1-208ENST00000493265 TDGQ13569 410 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 RUNX3Q13761 415 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 DPYSL3Q14195 570 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 DPYSL2Q16555 572 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 MPPE1Q53F39 396 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 TFAP2DQ7Z6R9 452 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 KATNAL2Q8IYT4 538 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 CARNMT1Q8N4J0 409 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 FLCNQ8NFG4 579 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 P2RY11Q96G91 374 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 HES6Q96HZ4 224 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 C16orf45Q96MC5 204 aaPredicted RBP17.72■□□□□ 0.43
LIME1-208ENST00000493265 WDR24Q96S15 920 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 ECT2Q9H8V3 914 aa17.72■□□□□ 0.43
LIME1-208ENST00000493265 CWC15Q9P013 229 aaKnown RBP17.72■□□□□ 0.43
LIME1-208ENST00000493265 OTOL1A6NHN0 477 aaPredicted RBP17.71■□□□□ 0.43
LIME1-208ENST00000493265 PROB1E7EW31 1015 aa17.71■□□□□ 0.43
LIME1-208ENST00000493265 ZRANB2O95218 330 aaKnown RBP eCLIP17.71■□□□□ 0.43
LIME1-208ENST00000493265 TYRP14679 529 aa17.71■□□□□ 0.43
LIME1-208ENST00000493265 PEX5P50542 639 aa17.71■□□□□ 0.43
LIME1-208ENST00000493265 NR1H3Q13133 447 aa17.71■□□□□ 0.43
LIME1-208ENST00000493265 SEMA3BQ13214 749 aa17.71■□□□□ 0.43
LIME1-208ENST00000493265 PDK2Q15119 407 aa17.71■□□□□ 0.43
LIME1-208ENST00000493265 ITPRIPL2Q3MIP1 535 aa17.71■□□□□ 0.43
LIME1-208ENST00000493265 ALFQ53S48 1182 aa17.71■□□□□ 0.43
LIME1-208ENST00000493265 ACBD5Q5T8D3 534 aaPredicted RBP17.71■□□□□ 0.43
LIME1-208ENST00000493265 AADACL2Q6P093 401 aa17.71■□□□□ 0.43
LIME1-208ENST00000493265 MFSD7Q6UXD7 560 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms