RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 LSM7Q9UK45 103 aaKnown RBP13.89□□□□□ -0.19
MSH6-208ENST00000493177 RAB23Q9ULC3 237 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.89□□□□□ -0.19
MSH6-208ENST00000493177 PCDHGA2Q9Y5H1 932 aa13.89□□□□□ -0.19
MSH6-208ENST00000493177 MYOFQ9NZM1 2061 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 OTOL1A6NHN0 477 aaPredicted RBP13.88□□□□□ -0.19
MSH6-208ENST00000493177 ENC1O14682 589 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 TRDMT1O14717 391 aaKnown RBP13.88□□□□□ -0.19
MSH6-208ENST00000493177 PSTPIP1O43586 416 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 ATG13O75143 517 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 EGFP01133 1207 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 KRT1P04264 644 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 KRT7P08729 469 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 IL1R2P27930 398 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 CASQ1P31415 396 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 HARS2P49590 506 aaKnown RBP13.88□□□□□ -0.19
MSH6-208ENST00000493177 GALK1P51570 392 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 SLC25A11Q02978 314 aaKnown RBP13.88□□□□□ -0.19
MSH6-208ENST00000493177 BOLA3Q53S33 107 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 TMEM196Q5HYL7 178 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 EFHC2Q5JST6 749 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 KCNT1Q5JUK3 1230 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 ERMARDQ5T6L9 678 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 MEI1Q5TIA1 1274 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 NUGGCQ68CJ6 796 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 SYT10Q6XYQ8 523 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 ZNF687Q8N1G0 1237 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 CHFRQ96EP1 664 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 SLC39A13Q96H72 371 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 FAM126AQ9BYI3 521 aaPredicted RBP13.88□□□□□ -0.19
MSH6-208ENST00000493177 KLHL11Q9NVR0 708 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 GPATCH2LQ9NWQ4 482 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 DNAI1Q9UI46 699 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 AP4E1Q9UPM8 1137 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 SLC8A2Q9UPR5 921 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 JRKLQ9Y4A0 524 aa13.88□□□□□ -0.19
MSH6-208ENST00000493177 KIAA1549LQ6ZVL6 1849 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 CCDC66A2RUB6 948 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 MIF4GDA9UHW6 222 aaKnown RBP13.87□□□□□ -0.19
MSH6-208ENST00000493177 KIF2AO00139 706 aaPredicted RBP13.87□□□□□ -0.19
MSH6-208ENST00000493177 RNF40O75150 1001 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 STC2O76061 302 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 ADH1CP00326 375 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 RARAP10276 462 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 CTNNA2P26232 953 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 CORO1AP31146 461 aaKnown RBP13.87□□□□□ -0.19
MSH6-208ENST00000493177 CTNNA1P35221 906 aaKnown RBP13.87□□□□□ -0.19
MSH6-208ENST00000493177 ADRA1BP35368 520 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 ETF1P62495 437 aaKnown RBP13.87□□□□□ -0.19
MSH6-208ENST00000493177 RING1Q06587 406 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 EIF4EBP2Q13542 120 aaPredicted RBP13.87□□□□□ -0.19
MSH6-208ENST00000493177 CCINQ13939 588 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 KRT81Q14533 505 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 FBXO43Q4G163 708 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 ATP13A4Q4VNC1 1196 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 HEATR6Q6AI08 1181 aaKnown RBP13.87□□□□□ -0.19
MSH6-208ENST00000493177 TXNRD3NBQ6F5E7 133 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 FSTL4Q6MZW2 842 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 PRR23BQ6ZRT6 265 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 NYAP1Q6ZVC0 841 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 KCTD6Q8NC69 237 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 CCDC26Q8TAB7 109 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 ZNF592Q92610 1267 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 KRT35Q92764 455 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 NTAN1Q96AB6 310 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 ZFRQ96KR1 1074 aaKnown RBP13.87□□□□□ -0.19
MSH6-208ENST00000493177 WDR24Q96S15 920 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 NAPGQ99747 312 aaPredicted RBP13.87□□□□□ -0.19
MSH6-208ENST00000493177 SNRNP25Q9BV90 132 aaKnown RBP13.87□□□□□ -0.19
MSH6-208ENST00000493177 DCLK3Q9C098 648 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 SIK2Q9H0K1 926 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 DHX35Q9H5Z1 703 aaKnown RBP13.87□□□□□ -0.19
MSH6-208ENST00000493177 TMPRSS4Q9NRS4 437 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.87□□□□□ -0.19
MSH6-208ENST00000493177 ARHGEF38Q9NXL2 777 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 DDX56Q9NY93 547 aaKnown RBP13.87□□□□□ -0.19
MSH6-208ENST00000493177 NCDNQ9UBB6 729 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 FZD10Q9ULW2 581 aa13.87□□□□□ -0.19
MSH6-208ENST00000493177 F5P12259 2224 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 E2F8A0AVK6 867 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 CTAGE9A4FU28 777 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 KCNU1A8MYU2 1149 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 PAGE1O75459 146 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 IGLV3-27P01718 113 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 ATP1A1P05023 1023 aaKnown RBP13.86□□□□□ -0.19
MSH6-208ENST00000493177 CYP17A1P05093 508 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 MARCKSL1P49006 195 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 SLC11A2P49281 568 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 AIF1P55008 147 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 RWDD2BP57060 319 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 ZXDBP98169 803 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 GAS6Q14393 721 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 DHCR24Q15392 516 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 ANO4Q32M45 955 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 LRRC38Q5VT99 294 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 POLNQ7Z5Q5 900 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 DENND1CQ8IV53 801 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 CCDC50Q8IVM0 306 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 KIAA1958Q8N8K9 716 aa13.86□□□□□ -0.19
MSH6-208ENST00000493177 TEKT4Q8WW24 435 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms