RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 UPK3BL1B0FP48 263 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 UPK3BL2E5RIL1 263 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 F5H5T6 163 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 H0Y626 953 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 GOLGA6L22H0YM25 854 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 HAX1O00165 279 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 PES1O00541 588 aaKnown RBP11.88□□□□□ -0.51
LRTM1-202ENST00000493075 DAB1O75553 588 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 MOCS3O95396 460 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 ERBB2P04626 1255 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 SRPRAP08240 638 aaKnown RBP11.88□□□□□ -0.51
LRTM1-202ENST00000493075 SYPP08247 313 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 HLA-EP13747 358 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 GNSP15586 552 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 CSKP41240 450 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 MATKP42679 507 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 OXCT1P55809 520 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 ST8SIA6P61647 398 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 PITX1P78337 314 aaPredicted RBP11.88□□□□□ -0.51
LRTM1-202ENST00000493075 CDH18Q13634 790 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 RAPGEF1Q13905 1077 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 PTPN20Q4JDL3 420 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 FSCBQ5H9T9 825 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 TTC39BQ5VTQ0 682 aaPredicted RBP11.88□□□□□ -0.51
LRTM1-202ENST00000493075 RAP1GAP2Q684P5 730 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 FAM183BPQ6ZVS7 135 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 CHSY1Q86X52 802 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 RGL4Q8IZJ4 473 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 CFAP52Q8N1V2 620 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 CARNMT1Q8N4J0 409 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 C18orf8Q96DM3 657 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 MYO19Q96H55 970 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 PPP1R9BQ96SB3 815 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 GPR174Q9BXC1 333 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 PDCL3Q9H2J4 239 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 SYNCQ9H7C4 482 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 FAM204AQ9H8W3 233 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 CD93Q9NPY3 652 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 ANO10Q9NW15 660 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 DDIT4Q9NX09 232 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 SCML1Q9UN30 329 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 FHOD1Q9Y613 1164 aa11.88□□□□□ -0.51
LRTM1-202ENST00000493075 TARSL2A2RTX5 802 aaKnown RBP11.87□□□□□ -0.51
LRTM1-202ENST00000493075 ARHGAP33O14559 1287 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 LSM8O95777 96 aaKnown RBP11.87□□□□□ -0.51
LRTM1-202ENST00000493075 CFIP05156 583 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 TPM2P07951 284 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 PNMA6AP0CW24 399 aaPredicted RBP11.87□□□□□ -0.51
LRTM1-202ENST00000493075 CEACAM1P13688 526 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 PLK1P53350 603 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 RPS14P62263 151 aaKnown RBP11.87□□□□□ -0.51
LRTM1-202ENST00000493075 SFSWAPQ12872 951 aaKnown RBP11.87□□□□□ -0.51
LRTM1-202ENST00000493075 HNRNPA1L2Q32P51 320 aaKnown RBP11.87□□□□□ -0.51
LRTM1-202ENST00000493075 C5orf22Q49AR2 442 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 PITRM1Q5JRX3 1037 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 RABGAP1LQ5R372 815 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 ACBD5Q5T8D3 534 aaPredicted RBP11.87□□□□□ -0.51
LRTM1-202ENST00000493075 N4BP2L1Q5TBK1 243 aaPredicted RBP11.87□□□□□ -0.51
LRTM1-202ENST00000493075 SASS6Q6UVJ0 657 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 ERICH1Q86X53 443 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 ZNF677Q86XU0 584 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 RNF34Q969K3 372 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 NT5C3BQ969T7 300 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 PGAP3Q96FM1 320 aaPredicted RBP11.87□□□□□ -0.51
LRTM1-202ENST00000493075 MRGPRX3Q96LB0 322 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 NPY6RQ99463 290 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 ZDHHC5Q9C0B5 715 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 RSPH9Q9H1X1 276 aaPredicted RBP11.87□□□□□ -0.51
LRTM1-202ENST00000493075 TAB2Q9NYJ8 693 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 ERVW-1Q9UQF0 538 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 SDK1Q7Z5N4 2213 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 ATXN2Q99700 1313 aaKnown RBP11.87□□□□□ -0.51
LRTM1-202ENST00000493075 ABCA7Q8IZY2 2146 aa11.87□□□□□ -0.51
LRTM1-202ENST00000493075 A0A1B0GTW7 788 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 A0A1B0GVM2 712 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 TCAF2A6NFQ2 919 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 LRRC10BA6NIK2 292 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 F8VZ95 297 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 M0QYT0 321 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 GRAP2O75791 330 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 F9P00740 461 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 DNTTP04053 509 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 CXCR3P49682 368 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 ATXN3P54252 364 aaPredicted RBP11.86□□□□□ -0.51
LRTM1-202ENST00000493075 ECT2LQ008S8 904 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 SULT2A1Q06520 285 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 SEMA3BQ13214 749 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 SLC14A1Q13336 389 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 KRT31Q15323 416 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 PLEKHG6Q3KR16 790 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 BRMS1LQ5PSV4 323 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 FKBP15Q5T1M5 1219 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 ZNF776Q68DI1 518 aaPredicted RBP11.86□□□□□ -0.51
LRTM1-202ENST00000493075 FBXL22Q6P050 247 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 ARCQ7LC44 396 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 CCAR2Q8N163 923 aaKnown RBP11.86□□□□□ -0.51
LRTM1-202ENST00000493075 ZNF366Q8N895 744 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 MSANTD4Q8NCY6 345 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 VPS16Q9H269 839 aa11.86□□□□□ -0.51
LRTM1-202ENST00000493075 GANQ9H2C0 597 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms