RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SIK2Q9H0K1 926 aa14.44□□□□□ -0.1
PTPN7-216ENST00000492977 CWH43Q9H720 699 aa14.44□□□□□ -0.1
PTPN7-216ENST00000492977 CATSPERBQ9H7T0 1116 aa14.44□□□□□ -0.1
PTPN7-216ENST00000492977 TLR8Q9NR97 1041 aaKnown RBP14.44□□□□□ -0.1
PTPN7-216ENST00000492977 GMIPQ9P107 970 aa14.44□□□□□ -0.1
PTPN7-216ENST00000492977 IGSF9Q9P2J2 1179 aa14.44□□□□□ -0.1
PTPN7-216ENST00000492977 PSMC3IPQ9P2W1 217 aaPredicted RBP14.44□□□□□ -0.1
PTPN7-216ENST00000492977 TBK1Q9UHD2 729 aa14.44□□□□□ -0.1
PTPN7-216ENST00000492977 CHMP2BQ9UQN3 213 aa14.44□□□□□ -0.1
PTPN7-216ENST00000492977 SNX10Q9Y5X0 201 aa14.44□□□□□ -0.1
PTPN7-216ENST00000492977 BACE2Q9Y5Z0 518 aa14.44□□□□□ -0.1
PTPN7-216ENST00000492977 ABHD14A-ACY1A0A1B0GW23 586 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 C2orf72A6NCS6 295 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 MSI1O43347 362 aaKnown RBP14.43□□□□□ -0.1
PTPN7-216ENST00000492977 AVILO75366 819 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 VNN2O95498 520 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 GARSP41250 739 aaKnown RBP14.43□□□□□ -0.1
PTPN7-216ENST00000492977 SYCP2LQ5T4T6 812 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 MANEALQ5VSG8 457 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 SLC8B1Q6J4K2 584 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 ZNF567Q8N184 647 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 NPWQ8N729 165 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 MDM1Q8TC05 714 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 DIS3LQ8TF46 1054 aaKnown RBP14.43□□□□□ -0.1
PTPN7-216ENST00000492977 TBC1D31Q96DN5 1066 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 SLC39A13Q96H72 371 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 IGSF21Q96ID5 467 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 FCRL2Q96LA5 508 aaPredicted RBP14.43□□□□□ -0.1
PTPN7-216ENST00000492977 XPO6Q96QU8 1125 aaKnown RBP14.43□□□□□ -0.1
PTPN7-216ENST00000492977 CYTH2Q99418 400 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 VAT1Q99536 393 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 DHRS4Q9BTZ2 278 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 INTS9Q9NV88 658 aaKnown RBP14.43□□□□□ -0.1
PTPN7-216ENST00000492977 SENP1Q9P0U3 644 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 SEPT10Q9P0V9 454 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 MTRRQ9UBK8 725 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 TRHDEQ9UKU6 1024 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 SLC27A5Q9Y2P5 690 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 CEP350Q5VT06 3117 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 GMNCA6NCL1 334 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 TRDMT1O14717 391 aaKnown RBP14.43□□□□□ -0.1
PTPN7-216ENST00000492977 SRGAP2BP0DMP2 458 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 STX2P32856 288 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 MLLT6P55198 1093 aaPredicted RBP14.43□□□□□ -0.1
PTPN7-216ENST00000492977 DUSP4Q13115 394 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 TMED2Q15363 201 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 RWDD4Q6NW29 188 aaKnown RBP14.43□□□□□ -0.1
PTPN7-216ENST00000492977 FBXO46Q6PJ61 603 aaPredicted RBP14.43□□□□□ -0.1
PTPN7-216ENST00000492977 ADGRD1Q6QNK2 874 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 ZNF534Q76KX8 674 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 PID1Q7Z2X4 250 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 TP53INP2Q8IXH6 220 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 RNF168Q8IYW5 571 aaPredicted RBP14.43□□□□□ -0.1
PTPN7-216ENST00000492977 NETO2Q8NC67 525 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 TOP1MTQ969P6 601 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 VWCEQ96DN2 955 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 SEPT5Q99719 369 aaPredicted RBP14.43□□□□□ -0.1
PTPN7-216ENST00000492977 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.43□□□□□ -0.1
PTPN7-216ENST00000492977 NEU3Q9UQ49 428 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 BOLA1Q9Y3E2 137 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 NR2E3Q9Y5X4 410 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 CDY1Q9Y6F8 540 aa14.43□□□□□ -0.1
PTPN7-216ENST00000492977 GREB1Q4ZG55 1949 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 CARNS1A5YM72 827 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 RASA4BC9J798 803 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 RASA4O43374 803 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 BRAFP15056 766 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 PTPN3P26045 913 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 GJA8P48165 433 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 TUFMP49411 452 aaKnown RBP14.42□□□□□ -0.1
PTPN7-216ENST00000492977 TBX4P57082 545 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 TAF10Q12962 218 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 MTM1Q13496 603 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 FAM182AQ5T1J6 154 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 ACBD5Q5T8D3 534 aaPredicted RBP14.42□□□□□ -0.1
PTPN7-216ENST00000492977 LRRC8BQ6P9F7 803 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 PRSS55Q6UWB4 352 aaPredicted RBP14.42□□□□□ -0.1
PTPN7-216ENST00000492977 TRABD2AQ86V40 505 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 SRRM1Q8IYB3 904 aaKnown RBP14.42□□□□□ -0.1
PTPN7-216ENST00000492977 AGGF1Q8N302 714 aaeCLIP14.42□□□□□ -0.1
PTPN7-216ENST00000492977 STKLD1Q8NE28 680 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 GPR152Q8TDT2 470 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 ATXN2LQ8WWM7 1075 aaKnown RBP14.42□□□□□ -0.1
PTPN7-216ENST00000492977 ARMC5Q96C12 935 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 SIGLEC10Q96LC7 697 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 TSGA13Q96PP4 275 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 EBNA1BP2Q99848 306 aaKnown RBP14.42□□□□□ -0.1
PTPN7-216ENST00000492977 CRISPLD1Q9H336 500 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 CCDC134Q9H6E4 229 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 PPANQ9NQ55 473 aaKnown RBP14.42□□□□□ -0.1
PTPN7-216ENST00000492977 FNIP2Q9P278 1114 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 KLHL8Q9P2G9 620 aaPredicted RBP14.42□□□□□ -0.1
PTPN7-216ENST00000492977 ZC3H7BQ9UGR2 993 aaKnown RBP14.42□□□□□ -0.1
PTPN7-216ENST00000492977 NUDT5Q9UKK9 219 aa14.42□□□□□ -0.1
PTPN7-216ENST00000492977 BRCA2P51587 3418 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 MYO18AQ92614 2054 aaKnown RBP14.41□□□□□ -0.1
PTPN7-216ENST00000492977 TCRBV9S1A1TA0A576 114 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 TMEM120BA0PK00 339 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 WASH4PA8MWX3 477 aa14.41□□□□□ -0.1
PTPN7-216ENST00000492977 KCNK1O00180 336 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms