RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 EIF2B4Q9UI10 523 aaKnown RBP12.9□□□□□ -0.34
COL6A1-205ENST00000492851 DACH1Q9UI36 760 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 PCDHGC3Q9UN70 934 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 CEP83Q9Y592 693 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 PCDHGB2Q9Y5G2 931 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 LAMA1P25391 3075 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 SPAARA0A1B0GVQ0 90 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 FAM221BA6H8Z2 402 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 KCNU1A8MYU2 1149 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 F5H5T6 163 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 DFNA5O60443 496 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 HSF2BPO75031 334 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 SLC9A1P19634 815 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 CD27P26842 260 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 ACSL1P33121 698 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 KRT9P35527 623 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 CSKP41240 450 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 MTIF2P46199 727 aaKnown RBP12.89□□□□□ -0.35
COL6A1-205ENST00000492851 RPS24P62847 133 aaKnown RBP12.89□□□□□ -0.35
COL6A1-205ENST00000492851 ECT2LQ008S8 904 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 PDCLQ13371 301 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 CAMK4Q16566 473 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 ARHGAP44Q17R89 818 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 DCAF6Q58WW2 860 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 RABGAP1LQ5R372 815 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 ACBD5Q5T8D3 534 aaPredicted RBP12.89□□□□□ -0.35
COL6A1-205ENST00000492851 TAC4Q86UU9 113 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 FAM124AQ86V42 546 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 CHSY1Q86X52 802 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 ZDHHC17Q8IUH5 632 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 NAXDQ8IW45 347 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 SHC3Q92529 594 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 RNF34Q969K3 372 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 PPP1R13BQ96KQ4 1090 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 CRACR2AQ9BSW2 395 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 NUCKS1Q9H1E3 243 aaKnown RBP12.89□□□□□ -0.35
COL6A1-205ENST00000492851 GAREM1Q9H706 876 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 RRN3Q9NYV6 651 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 ERVW-1Q9UQF0 538 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 APOBEC2Q9Y235 224 aaKnown RBP12.89□□□□□ -0.35
COL6A1-205ENST00000492851 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.89□□□□□ -0.35
COL6A1-205ENST00000492851 MSRB2Q9Y3D2 182 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 TNRC6BQ9UPQ9 1833 aaKnown RBP12.89□□□□□ -0.35
COL6A1-205ENST00000492851 SPTBN2O15020 2390 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 ACACBO00763 2458 aa12.89□□□□□ -0.35
COL6A1-205ENST00000492851 EDDM13A0A1B0GTR0 161 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 LRRC72A6NJI9 287 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 SH3BP5O60239 455 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 KRT37O76014 449 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 MOCS2O96007 188 aaPredicted RBP12.88□□□□□ -0.35
COL6A1-205ENST00000492851 CALCAP01258 141 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 IGLV3-25P01717 112 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 TACR2P21452 398 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 PON1P27169 355 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 GRIA4P48058 902 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 EIF4EBP2Q13542 120 aaPredicted RBP12.88□□□□□ -0.35
COL6A1-205ENST00000492851 HLA-BQ31612 363 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 ZC3H12AQ5D1E8 599 aaKnown RBP12.88□□□□□ -0.35
COL6A1-205ENST00000492851 CT47A1Q5JQC4 288 aaPredicted RBP12.88□□□□□ -0.35
COL6A1-205ENST00000492851 PITRM1Q5JRX3 1037 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 C11orf57Q6ZUT1 292 aaPredicted RBP12.88□□□□□ -0.35
COL6A1-205ENST00000492851 GLRX5Q86SX6 157 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 CACUL1Q86Y37 369 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 LGI2Q8N0V4 545 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 CFAP52Q8N1V2 620 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 C1orf216Q8TAB5 229 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 ADAM32Q8TC27 787 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 GANCQ8TET4 914 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 SETD7Q8WTS6 366 aaKnown RBP12.88□□□□□ -0.35
COL6A1-205ENST00000492851 SNX19Q92543 992 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 PRICKLE1Q96MT3 831 aaPredicted RBP12.88□□□□□ -0.35
COL6A1-205ENST00000492851 CDC6Q99741 560 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 PABPC3Q9H361 631 aaKnown RBP12.88□□□□□ -0.35
COL6A1-205ENST00000492851 C6orf106Q9H6K1 298 aaPredicted RBP12.88□□□□□ -0.35
COL6A1-205ENST00000492851 SYNCQ9H7C4 482 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 FAM204AQ9H8W3 233 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 TM7SF3Q9NS93 570 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 FBXL12Q9NXK8 326 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 CHMP5Q9NZZ3 219 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 FZD4Q9ULV1 537 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 PAXBP1Q9Y5B6 917 aa12.88□□□□□ -0.35
COL6A1-205ENST00000492851 MYO18AQ92614 2054 aaKnown RBP12.88□□□□□ -0.35
COL6A1-205ENST00000492851 FLRT2O43155 660 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 ERCC5P28715 1186 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-205ENST00000492851 VASPP50552 380 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-205ENST00000492851 PLK1P53350 603 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 CST6Q15828 149 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 MAN2A1Q16706 1144 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 C9orf64Q5T6V5 341 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 RAP1GAP2Q684P5 730 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 DBX2Q6ZNG2 339 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 ZNF366Q8N895 744 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 C1orf131Q8NDD1 294 aaKnown RBP12.87□□□□□ -0.35
COL6A1-205ENST00000492851 OR2I1PQ8NGU4 316 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 WFDC5Q8TCV5 224 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 BIRC7Q96CA5 298 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 MRGPRX3Q96LB0 322 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 SLC2A13Q96QE2 648 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 OMDQ99983 421 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 PDCL3Q9H2J4 239 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms