RNA–Protein interactions for RNA: ENST00000492485.5

TRIOBP-211, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 1 (best)

Gene TRIOBP, Length 3,948 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-211ENST00000492485 LMO3Q8TAP4 145 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 LPAR1Q92633 364 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 RNF157Q96PX1 679 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 SLC4A5Q9BY07 1137 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 HBS1LQ9Y450 684 aaKnown RBP12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 MOXD2PA6NHM9 499 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 AHCYL1O43865 530 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 LTFP02788 710 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 ITGA2BP08514 1039 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 THRAP10827 490 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 BACE1P56817 501 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 YWHAZP63104 245 aaKnown RBP12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 PARP6Q2NL67 630 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 STYK1Q6J9G0 422 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 MAGEE2Q8TD90 523 aaPredicted RBP12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 FICDQ9BVA6 458 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 APOL5Q9BWW9 433 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 PDGFDQ9GZP0 370 aaPredicted RBP12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 NOL11Q9H8H0 719 aaKnown RBP12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 PRDM5Q9NQX1 630 aaPredicted RBP12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 CHRAC1Q9NRG0 131 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 BTRCQ9Y297 605 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 NRXN3Q9Y4C0 1643 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 SUPT3HB4E1H0 165 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 VNN1O95497 513 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 ATP6V1B2P21281 511 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 UBA1P22314 1058 aaKnown RBP12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 PSEN1P49768 467 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 MXD4Q14582 209 aaPredicted RBP12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 CCDC142Q17RM4 750 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 DALRD3Q5D0E6 543 aaKnown RBP12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 CWF19L1Q69YN2 538 aaKnown RBP12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 MFN1Q8IWA4 741 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 NAT14Q8WUY8 206 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 EPAS1Q99814 870 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 KCNK4Q9NYG8 393 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 FAM50BQ9Y247 325 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 TMA7Q9Y2S6 64 aaKnown RBP12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 PRG3Q9Y2Y8 225 aaPredicted RBP12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 PLLPQ9Y342 182 aa12.64□□□□□ -0.39
TRIOBP-211ENST00000492485 CASTOR2A6NHX0 329 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 SRRM3A6NNA2 597 aaPredicted RBP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 TFPTP0C1Z6 253 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 YAP1P46937 504 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 NRG1Q02297 640 aaPredicted RBP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 ACBD5Q5T8D3 534 aaPredicted RBP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 GPR107Q5VW38 600 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 C16orf89Q6UX73 402 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 OR52K2Q8NGK3 314 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 THUMPD3Q9BV44 507 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 GPAMQ9HCL2 828 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 PDGFCQ9NRA1 345 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 NDFIP2Q9NV92 336 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 CPSF3Q9UKF6 684 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 ACOT9Q9Y305 439 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 ZC3H11AO75152 810 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 TRUB2O95900 331 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 ALADP13716 330 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 GRIA4P48058 902 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 TTLL4Q14679 1199 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 LBRQ14739 615 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 KCNMB4Q86W47 210 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 BRSK2Q8IWQ3 736 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 TTC30BQ8N4P2 665 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 ATPAF2Q8N5M1 289 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 FAM47BQ8NA70 645 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 SHKBP1Q8TBC3 707 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 C18orf25Q96B23 403 aaPredicted RBP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 IFT43Q96FT9 208 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 PANX3Q96QZ0 392 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 OXCT2Q9BYC2 517 aaPredicted RBP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 PSAT1Q9Y617 370 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 MYH3P11055 1940 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 SNX2O60749 519 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 FKBP6O75344 327 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 PCYT1AP49585 367 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 CHN2P52757 468 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 DDX39BQ13838 428 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 CNPY1Q3B7I2 92 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 C1orf220Q5T0J3 134 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 SLC44A1Q8WWI5 657 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 OLA1Q9NTK5 396 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 PAIP2BQ9ULR5 123 aaKnown RBP12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 U3KQV3 271 aa12.63□□□□□ -0.39
TRIOBP-211ENST00000492485 SIGLEC16A6NMB1 481 aa12.62□□□□□ -0.39
TRIOBP-211ENST00000492485 B3GAT3O94766 335 aa12.62□□□□□ -0.39
TRIOBP-211ENST00000492485 ASS1P00966 412 aaKnown RBP12.62□□□□□ -0.39
TRIOBP-211ENST00000492485 ITGAVP06756 1048 aa12.62□□□□□ -0.39
TRIOBP-211ENST00000492485 USP17L7P0C7H9 530 aa12.62□□□□□ -0.39
TRIOBP-211ENST00000492485 ME2P23368 584 aa12.62□□□□□ -0.39
TRIOBP-211ENST00000492485 IRF9Q00978 393 aa12.62□□□□□ -0.39
TRIOBP-211ENST00000492485 ITGADQ13349 1161 aa12.62□□□□□ -0.39
TRIOBP-211ENST00000492485 SFT2D3Q587I9 215 aa12.62□□□□□ -0.39
TRIOBP-211ENST00000492485 SLC9A4Q6AI14 798 aa12.62□□□□□ -0.39
TRIOBP-211ENST00000492485 PMF1Q6P1K2 205 aa12.62□□□□□ -0.39
TRIOBP-211ENST00000492485 TATDN1Q6P1N9 297 aa12.62□□□□□ -0.39
TRIOBP-211ENST00000492485 POTEAQ6S8J7 498 aa12.62□□□□□ -0.39
TRIOBP-211ENST00000492485 GPR141Q7Z602 305 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms