RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 CMTM8Q8IZV2 173 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 KIAA1958Q8N8K9 716 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 CMASQ8NFW8 434 aaPredicted RBP11.11□□□□□ -0.63
ATF3-209ENST00000492118 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.11□□□□□ -0.63
ATF3-209ENST00000492118 CDCA3Q99618 268 aaPredicted RBP11.11□□□□□ -0.63
ATF3-209ENST00000492118 CARD9Q9H257 536 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 DDX56Q9NY93 547 aaKnown RBP11.11□□□□□ -0.63
ATF3-209ENST00000492118 LCMT1Q9UIC8 334 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 R3HDM2Q9Y2K5 976 aaKnown RBP11.11□□□□□ -0.63
ATF3-209ENST00000492118 HS3ST4Q9Y661 456 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 PGRMC1O00264 195 aaKnown RBP11.11□□□□□ -0.63
ATF3-209ENST00000492118 LRIG2O94898 1065 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 FSHRP23945 695 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 IL4RP24394 825 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 EPHB2P29323 1055 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 PAFAH1B1P43034 410 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 TPI1P60174 286 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 ANKRD20A8PQ5CZ79 823 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 PRSS36Q5K4E3 855 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 LRRC38Q5VT99 294 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 NADSYN1Q6IA69 706 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 TPGS1Q6ZTW0 290 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 CHSY1Q86X52 802 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 ARID3BQ8IVW6 561 aaPredicted RBP11.11□□□□□ -0.63
ATF3-209ENST00000492118 TP53INP2Q8IXH6 220 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 RIN3Q8TB24 985 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 ZSCAN18Q8TBC5 510 aaPredicted RBP11.11□□□□□ -0.63
ATF3-209ENST00000492118 SH3RF2Q8TEC5 729 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 FRS2Q8WU20 508 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 FGF13Q92913 245 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 PGAP3Q96FM1 320 aaPredicted RBP11.11□□□□□ -0.63
ATF3-209ENST00000492118 SLC39A13Q96H72 371 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 RBM41Q96IZ5 413 aaKnown RBP11.11□□□□□ -0.63
ATF3-209ENST00000492118 PBKQ96KB5 322 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 ZFRQ96KR1 1074 aaKnown RBP11.11□□□□□ -0.63
ATF3-209ENST00000492118 KLF16Q9BXK1 252 aaPredicted RBP11.11□□□□□ -0.63
ATF3-209ENST00000492118 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.11□□□□□ -0.63
ATF3-209ENST00000492118 PLK2Q9NYY3 685 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 STIM2Q9P246 746 aa11.11□□□□□ -0.63
ATF3-209ENST00000492118 hCG_1818297A0A087WSY0 165 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 SLC6A4P31645 630 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 STIP1P31948 543 aaKnown RBP11.1□□□□□ -0.63
ATF3-209ENST00000492118 GBP2P32456 591 aaPredicted RBP11.1□□□□□ -0.63
ATF3-209ENST00000492118 ARL4AP40617 200 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 PPP3CCP48454 512 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 TUBP50607 506 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 COG7P83436 770 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 EIF4EBP2Q13542 120 aaPredicted RBP11.1□□□□□ -0.63
ATF3-209ENST00000492118 MS4A13Q5J8X5 152 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 CES5AQ6NT32 575 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 BEND5Q7L4P6 421 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 SLC13A5Q86YT5 568 aaPredicted RBP11.1□□□□□ -0.63
ATF3-209ENST00000492118 MAP7D3Q8IWC1 876 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 LGI2Q8N0V4 545 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 PCDH19Q8TAB3 1148 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 ADAMTS19Q8TE59 1207 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 HDAC7Q8WUI4 952 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 USP13Q92995 863 aaPredicted RBP11.1□□□□□ -0.63
ATF3-209ENST00000492118 RPRD1AQ96P16 312 aaPredicted RBP11.1□□□□□ -0.63
ATF3-209ENST00000492118 CSPG4P5Q96PW8 444 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 CDK5RAP1Q96SZ6 601 aaKnown RBP11.1□□□□□ -0.63
ATF3-209ENST00000492118 RBM12Q9NTZ6 932 aaKnown RBP11.1□□□□□ -0.63
ATF3-209ENST00000492118 DZANK1Q9NVP4 752 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 ARHGEF38Q9NXL2 777 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 SLC12A6Q9UHW9 1150 aa11.1□□□□□ -0.63
ATF3-209ENST00000492118 AGO1Q9UL18 857 aaKnown RBP11.1□□□□□ -0.63
ATF3-209ENST00000492118 LEFTY2O00292 366 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 CNTN5O94779 1100 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 FOSL2P15408 326 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 PECAM1P16284 738 aaPredicted RBP11.09□□□□□ -0.63
ATF3-209ENST00000492118 KCNJ1P48048 391 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 SGSHP51688 502 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 RPS24P62847 133 aaKnown RBP11.09□□□□□ -0.63
ATF3-209ENST00000492118 AUHQ13825 339 aaKnown RBP11.09□□□□□ -0.63
ATF3-209ENST00000492118 DPYSL2Q16555 572 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 ZSCAN26Q16670 478 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 MAP9Q49MG5 647 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 ATAT1Q5SQI0 421 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 RFX8Q6ZV50 586 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 GPR149Q86SP6 731 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 ZC3H18Q86VM9 953 aaKnown RBP11.09□□□□□ -0.63
ATF3-209ENST00000492118 TAX1BP1Q86VP1 789 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 BBS7Q8IWZ6 715 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 NPAS3Q8IXF0 933 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 ATP6V0D2Q8N8Y2 350 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 TEKT4Q8WW24 435 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 CELF6Q96J87 481 aaKnown RBP11.09□□□□□ -0.63
ATF3-209ENST00000492118 MPP4Q96JB8 637 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 ZFYVE19Q96K21 471 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 BTN2A3PQ96KV6 586 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 DDX47Q9H0S4 455 aaKnown RBP11.09□□□□□ -0.63
ATF3-209ENST00000492118 EPC1Q9H2F5 836 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 TASP1Q9H6P5 420 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 TDP1Q9NUW8 608 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 MUC3AQ02505 3323 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 E9PAM4 449 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 ZNF197O14709 1029 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 SLC2A3P11169 496 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 CETN2P41208 172 aa11.09□□□□□ -0.63
ATF3-209ENST00000492118 ARSEP51690 589 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms