RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 DCAF12L1Q5VU92 463 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 GJB7Q6PEY0 223 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 GBP6Q6ZN66 633 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 CLEC17AQ6ZS10 378 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 USP30Q70CQ3 517 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 RAB44Q7Z6P3 723 aaPredicted RBP8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 GLRX5Q86SX6 157 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 HDDC3Q8N4P3 179 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 OR2I1PQ8NGU4 316 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 BAHD1Q8TBE0 780 aaPredicted RBP8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 GOLGA1Q92805 767 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 NT5C3BQ969T7 300 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 FAM131CQ96AQ9 280 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 ALG14Q96F25 216 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 BTN2A3PQ96KV6 586 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 CRACR2AQ9BSW2 395 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 NUCKS1Q9H1E3 243 aaKnown RBP8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 POPDC2Q9HBU9 364 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 ADAMTS1Q9UHI8 967 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 XPO7Q9UIA9 1087 aaKnown RBP8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 SCML1Q9UN30 329 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 NEUROG3Q9Y4Z2 214 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 PCDHGB2Q9Y5G2 931 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 SLCO1B1Q9Y6L6 691 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 TMEM131Q92545 1883 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 NYNRINQ9P2P1 1898 aaKnown RBP8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 DOCK9Q9BZ29 2069 aa8.68□□□□□ -1.02
SMARCB1-207ENST00000491967 TARSL2A2RTX5 802 aaKnown RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 TMEM8BA6NDV4 472 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 H0Y626 953 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 TRIM16O95361 564 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 SRPRAP08240 638 aaKnown RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 SLC2A3P11169 496 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 ACADMP11310 421 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 POLR2EP19388 210 aaKnown RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 ERCC5P28715 1186 aaPredicted RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 GNA15P30679 374 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 CDH5P33151 784 aaPredicted RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 CLCN1P35523 988 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 CSKP41240 450 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 SIM1P81133 766 aaPredicted RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 APBA1Q02410 837 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 ARID5AQ03989 594 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 MTA1Q13330 715 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 GOLGA4Q13439 2230 aaKnown RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 SLC12A1Q13621 1099 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 TAF5Q15542 800 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 CAMK4Q16566 473 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 EXOC3L4Q17RC7 722 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 ZNF423Q2M1K9 1284 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 FNDC3BQ53EP0 1204 aaKnown RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 ZC3H12AQ5D1E8 599 aaKnown RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 PITRM1Q5JRX3 1037 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 EFHC1Q5JVL4 640 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 MIIPQ5JXC2 388 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 ANKRD11Q6UB99 2663 aaPredicted RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 IL27RAQ6UWB1 636 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 SLC26A9Q7LBE3 791 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 ZFHX4Q86UP3 3567 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 MFN1Q8IWA4 741 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 FAM71AQ8IYT1 594 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 ZNF397Q8NF99 534 aaPredicted RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 ADAM32Q8TC27 787 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 DMXL2Q8TDJ6 3036 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 BIRC7Q96CA5 298 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 CPXM1Q96SM3 734 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 FAM129BQ96TA1 746 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 SCNM1Q9BWG6 230 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 GTPBP2Q9BX10 602 aaKnown RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 PABPC3Q9H361 631 aaKnown RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 C6orf106Q9H6K1 298 aaPredicted RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 SGK2Q9HBY8 427 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 ST7Q9NRC1 585 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 KIAA1522Q9P206 1035 aaPredicted RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 TJP2Q9UDY2 1190 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 EIF2B4Q9UI10 523 aaKnown RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 AJAP1Q9UKB5 411 aaPredicted RBP8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 ERVW-1Q9UQF0 538 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 MSRB2Q9Y3D2 182 aa8.67□□□□□ -1.02
SMARCB1-207ENST00000491967 ACACAQ13085 2346 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 TP53BP1Q12888 1972 aaPredicted RBP8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 CHD5Q8TDI0 1954 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 SPAARA0A1B0GVQ0 90 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 MEI4A8MW99 385 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 C1QTNF9BB2RNN3 333 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 FOXN3O00409 490 aaPredicted RBP8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 THAP12O43422 761 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 SH3BP5O60239 455 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 HSF2BPO75031 334 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 SEMA4FO95754 770 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 IGHV4-34P06331 123 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 C1QTNF9P0C862 333 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 TACR2P21452 398 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 KCNA4P22459 653 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 CD27P26842 260 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 GRIA4P48058 902 aa8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 AFF3P51826 1226 aaKnown RBP8.66□□□□□ -1.02
SMARCB1-207ENST00000491967 ATXN3P54252 364 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms