RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 SYNCQ9H7C4 482 aa11.46□□□□□ -0.57
TMEM39A-211ENST00000491685 ST7Q9NRC1 585 aa11.46□□□□□ -0.57
TMEM39A-211ENST00000491685 USP36Q9P275 1121 aaKnown RBP11.46□□□□□ -0.57
TMEM39A-211ENST00000491685 STRIP2Q9ULQ0 834 aa11.46□□□□□ -0.57
TMEM39A-211ENST00000491685 PLXNA2O75051 1894 aa11.46□□□□□ -0.58
TMEM39A-211ENST00000491685 SPAARA0A1B0GVQ0 90 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 GFRA2O00451 464 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 NPC1O15118 1278 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 SART1O43290 800 aaKnown RBP11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 ZNF217O75362 1048 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 FBXO21O94952 628 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 SERPINF2P08697 491 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 CEACAM1P13688 526 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 HLA-EP13747 358 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 LCP1P13796 627 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 CHKAP35790 457 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 GPD2P43304 727 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 COPAP53621 1224 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 DAOAP59103 153 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 FAM193AP78312 1265 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 CDR2Q01850 454 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 SEMA3BQ13214 749 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 DUOXA1Q1HG43 343 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 BSPRYQ5W0U4 402 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 ANKS1BQ7Z6G8 1248 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 PIP4P1Q86T03 277 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 ERICH1Q86X53 443 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 CNGA4Q8IV77 575 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 VSTM4Q8IW00 320 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 WFDC5Q8TCV5 224 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 DDI1Q8WTU0 396 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 PLD4Q96BZ4 506 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 AGPAT1Q99943 283 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 TRIM62Q9BVG3 475 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 CNGB3Q9NQW8 809 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 SEPT11Q9NVA2 429 aaKnown RBP11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 SLC6A14Q9UN76 642 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 PCNX2A6NKB5 2137 aa11.45□□□□□ -0.58
TMEM39A-211ENST00000491685 LRRC53A6NM62 1247 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 SRRM3A6NNA2 597 aaPredicted RBP11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 AKR1B15C9JRZ8 316 aaPredicted RBP11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 EPHB6O15197 1021 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 LSM8O95777 96 aaKnown RBP11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 CYBBP04839 570 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 CDC25BP30305 580 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 HLA-FP30511 346 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 CASP14P31944 242 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 HOXD12P35452 270 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 ZNF75DP51815 510 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 PMF1Q6P1K2 205 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 TMC6Q7Z403 805 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 IRF2BP2Q7Z5L9 587 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 ZDHHC17Q8IUH5 632 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 MINDY1Q8N5J2 469 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 ZNF366Q8N895 744 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 CYB5D2Q8WUJ1 264 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 IRGQQ8WZA9 623 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 GATA6Q92908 595 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 MYEOVQ96EZ4 313 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 TOE1Q96GM8 510 aaKnown RBP11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 ZNF419Q96HQ0 510 aaPredicted RBP11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 PPP1R13BQ96KQ4 1090 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 CAMK1GQ96NX5 476 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 CIPCQ9C0C6 399 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 PRDM16Q9HAZ2 1276 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 ELOVL2Q9NXB9 296 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 WSB2Q9NYS7 404 aaPredicted RBP11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 AJAP1Q9UKB5 411 aaPredicted RBP11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 SLCO1B1Q9Y6L6 691 aa11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 GCN1Q92616 2671 aaKnown RBP11.44□□□□□ -0.58
TMEM39A-211ENST00000491685 ADAMTS20P59510 1910 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 GOLGA6L7A0A1B0GV03 622 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 ARHGAP33O14559 1287 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 HYAL3O43820 417 aaPredicted RBP11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 NDUFS2O75306 463 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 SERPING1P05155 500 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 PNMA6AP0CW24 399 aaPredicted RBP11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 NCAM1P13591 858 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 CD59P13987 128 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 CD6P30203 668 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 SLC6A4P31645 630 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 TPMTP51580 245 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 GFPT1Q06210 699 aaPredicted RBP11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 STARD3Q14849 445 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 TDRD12Q587J7 1177 aaKnown RBP11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 EFHC1Q5JVL4 640 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 TAF3Q5VWG9 929 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 MSANTD2Q6P1R3 559 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 DENND1BQ6P3S1 775 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 RFWD3Q6PCD5 774 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 TMEM110Q86TL2 294 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 TMPRSS6Q8IU80 811 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 RGL4Q8IZJ4 473 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 SCML4Q8N228 414 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 ZCCHC9Q8N567 271 aaKnown RBP11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 CEP76Q8TAP6 659 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 RNF139Q8WU17 664 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 UCMAQ8WVF2 138 aa11.43□□□□□ -0.58
TMEM39A-211ENST00000491685 BAP1Q92560 729 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms