RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 NOCTQ9UK39 431 aaKnown RBP15.61■□□□□ 0.09
USP39-217ENST00000491659 FAM170AA1A519 330 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 SMTNL1A8MU46 457 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 GOLGA8SH3BPF8 625 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 GDF9O60383 454 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 NDUFS2O75306 463 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 ASLP04424 464 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 ACADMP11310 421 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 PTGER3P43115 390 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 LIMK1P53667 647 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 ATXN1P54253 815 aaKnown RBP15.6■□□□□ 0.09
USP39-217ENST00000491659 ST8SIA6P61647 398 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 TCEAL6Q6IPX3 200 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 TRIM72Q6ZMU5 477 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 METTL3Q86U44 580 aaKnown RBP15.6■□□□□ 0.09
USP39-217ENST00000491659 CACUL1Q86Y37 369 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 TMPRSS6Q8IU80 811 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 OR2T3Q8NH03 318 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 SLC20A1Q8WUM9 679 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 CPA5Q8WXQ8 436 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 TCEAL3Q969E4 200 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 SIPA1Q96FS4 1042 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 ERGIC2Q96RQ1 377 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 MKRN2Q9H000 416 aaKnown RBP15.6■□□□□ 0.09
USP39-217ENST00000491659 TMEM245Q9H330 911 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 FBRSQ9HAH7 460 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 KIAA1522Q9P206 1035 aaPredicted RBP15.6■□□□□ 0.09
USP39-217ENST00000491659 PAXBP1Q9Y5B6 917 aa15.6■□□□□ 0.09
USP39-217ENST00000491659 ATXN2Q99700 1313 aaKnown RBP15.6■□□□□ 0.09
USP39-217ENST00000491659 LRRC10BA6NIK2 292 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 KHNYNO15037 678 aaKnown RBP15.59■□□□□ 0.09
USP39-217ENST00000491659 ATP1A3P13637 1013 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 CSKP41240 450 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 COPAP53621 1224 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 FMO1Q01740 532 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 CAMK2GQ13555 558 aaPredicted RBP15.59■□□□□ 0.09
USP39-217ENST00000491659 PTPRNQ16849 979 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 C2CD6Q53TS8 623 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 PITRM1Q5JRX3 1037 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 BRMS1LQ5PSV4 323 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 IL31Q6EBC2 164 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 SYT12Q8IV01 421 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 LMLNQ96KR4 655 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 RPRD1AQ96P16 312 aaPredicted RBP15.59■□□□□ 0.09
USP39-217ENST00000491659 NPY6RQ99463 290 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 PRMT1Q99873 361 aaKnown RBP15.59■□□□□ 0.09
USP39-217ENST00000491659 EDEM2Q9BV94 578 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 HSD3B7Q9H2F3 369 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 CD93Q9NPY3 652 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 TMEM51Q9NW97 253 aa15.59■□□□□ 0.09
USP39-217ENST00000491659 USP36Q9P275 1121 aaKnown RBP15.59■□□□□ 0.09
USP39-217ENST00000491659 A0A1B0GVM2 712 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 TCAF2A6NFQ2 919 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 F9P00740 461 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 CYP1A1P04798 512 aaPredicted RBP15.58■□□□□ 0.08
USP39-217ENST00000491659 CD6P30203 668 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 HOXD12P35452 270 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 DEUP1Q05D60 604 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 ZNF33AQ06730 810 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 SLC12A1Q13621 1099 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 AUHQ13825 339 aaKnown RBP15.58■□□□□ 0.08
USP39-217ENST00000491659 FSCBQ5H9T9 825 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 OTUD1Q5VV17 481 aaPredicted RBP15.58■□□□□ 0.08
USP39-217ENST00000491659 RNF219Q5W0B1 726 aaPredicted RBP15.58■□□□□ 0.08
USP39-217ENST00000491659 MMS22LQ6ZRQ5 1243 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 APTXQ7Z2E3 356 aaKnown RBP15.58■□□□□ 0.08
USP39-217ENST00000491659 CIR1Q86X95 450 aaPredicted RBP15.58■□□□□ 0.08
USP39-217ENST00000491659 DHX40Q8IX18 779 aaKnown RBP15.58■□□□□ 0.08
USP39-217ENST00000491659 CCAR2Q8N163 923 aaKnown RBP15.58■□□□□ 0.08
USP39-217ENST00000491659 DEFB119Q8N690 84 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 ZNF366Q8N895 744 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 TTC17Q96AE7 1141 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 HSPA12BQ96MM6 686 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 TBCBQ99426 244 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 WDCPQ9H6R7 721 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 RXFP3Q9NSD7 469 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 PIGVQ9NUD9 493 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 SUN2Q9UH99 717 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 VANGL2Q9ULK5 521 aa15.58■□□□□ 0.08
USP39-217ENST00000491659 LNP1A1A4G5 178 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 PAGE1O75459 146 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 SRPRAP08240 638 aaKnown RBP15.57■□□□□ 0.08
USP39-217ENST00000491659 CHRNB2P17787 502 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 PTMSP20962 102 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 ITPKAP23677 461 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 OXTRP30559 389 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 FLT3P36888 993 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 NSFP46459 744 aaKnown RBP15.57■□□□□ 0.08
USP39-217ENST00000491659 CXCR3P49682 368 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 ZNF165P49910 485 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 TPMTP51580 245 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 OXCT1P55809 520 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 CENPCQ03188 943 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 PLEKHG6Q3KR16 790 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 SLC25A52Q3SY17 297 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 FILIP1LQ4L180 1135 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 TRIM61Q5EBN2 209 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 STPG1Q5TH74 334 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 FBXL22Q6P050 247 aa15.57■□□□□ 0.08
USP39-217ENST00000491659 RABEPKQ7Z6M1 372 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms