RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CDH9Q9ULB4 789 aa7.9□□□□□ -1.14
CLDN1-202ENST00000490800 SMG5Q9UPR3 1016 aaKnown RBP7.9□□□□□ -1.14
CLDN1-202ENST00000490800 DYRK1BQ9Y463 629 aa7.9□□□□□ -1.14
CLDN1-202ENST00000490800 GPC6Q9Y625 555 aaPredicted RBP7.9□□□□□ -1.14
CLDN1-202ENST00000490800 TSC2P49815 1807 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 DCHS1Q96JQ0 3298 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 TRAV19A0A0A6YYK7 116 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 TCRBV5S1A1TA0A578 114 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 C2orf78A6NCI8 922 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 K7ESF4 209 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 ENC1O14682 589 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 URI1O94763 535 aaPredicted RBP7.89□□□□□ -1.15
CLDN1-202ENST00000490800 FTCDO95954 541 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 ERBB2P04626 1255 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 CKMP06732 381 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 USP17L7P0C7H9 530 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 SETSIPP0DME0 302 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 HDCP19113 662 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 TGM1P22735 817 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 ADORA2BP29275 332 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 SRSF5Q13243 272 aaKnown RBP7.89□□□□□ -1.15
CLDN1-202ENST00000490800 PDCLQ13371 301 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 MAMLD1Q13495 774 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 SIM2Q14190 667 aaPredicted RBP7.89□□□□□ -1.15
CLDN1-202ENST00000490800 ZNF268Q14587 947 aaPredicted RBP7.89□□□□□ -1.15
CLDN1-202ENST00000490800 MAPRE1Q15691 268 aaKnown RBP7.89□□□□□ -1.15
CLDN1-202ENST00000490800 RSPO4Q2I0M5 234 aaPredicted RBP7.89□□□□□ -1.15
CLDN1-202ENST00000490800 MDH1BQ5I0G3 518 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 HEATR6Q6AI08 1181 aaKnown RBP7.89□□□□□ -1.15
CLDN1-202ENST00000490800 PLEKHA7Q6IQ23 1121 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 FSTL4Q6MZW2 842 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 PKN3Q6P5Z2 889 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 VSTM1Q6UX27 236 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 PRR23BQ6ZRT6 265 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 RIPOR1Q6ZS17 1223 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 DENND5BQ6ZUT9 1274 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 ERMP1Q7Z2K6 904 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 ERICH1Q86X53 443 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 FUKQ8N0W3 1084 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 SYNPOQ8N3V7 929 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 ANKRD52Q8NB46 1076 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 MYCBPAPQ8TBZ2 947 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 ZNF564Q8TBZ8 553 aaPredicted RBP7.89□□□□□ -1.15
CLDN1-202ENST00000490800 SLC2A14Q8TDB8 520 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 EDEM1Q92611 657 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 PCED1BQ96HM7 432 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 BTBD6Q96KE9 485 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 CPXM1Q96SM3 734 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 HNRNPABQ99729 332 aaKnown RBP7.89□□□□□ -1.15
CLDN1-202ENST00000490800 TLR10Q9BXR5 811 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 TRIM7Q9C029 511 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 LINC00597Q9H2U6 94 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 L2HGDHQ9H9P8 463 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 KIF9Q9HAQ2 790 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 DUS2Q9NX74 493 aaKnown RBP7.89□□□□□ -1.15
CLDN1-202ENST00000490800 TJP2Q9UDY2 1190 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 JRKLQ9Y4A0 524 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 DNAH14Q0VDD8 3507 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 TICRRQ7Z2Z1 1910 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 GPR179Q6PRD1 2367 aa7.89□□□□□ -1.15
CLDN1-202ENST00000490800 TMEM110-MUSTN1A8MSY1 372 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 F8VP50 259 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 TULP2O00295 520 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 CLDN5O00501 218 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 TRDMT1O14717 391 aaKnown RBP7.88□□□□□ -1.15
CLDN1-202ENST00000490800 PAPSS2O95340 614 aaPredicted RBP7.88□□□□□ -1.15
CLDN1-202ENST00000490800 GJB6O95452 261 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 EGFP01133 1207 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 GJA4P35212 333 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 GABRB2P47870 512 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 PXNP49023 591 aaPredicted RBP7.88□□□□□ -1.15
CLDN1-202ENST00000490800 RGS7P49802 495 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 IDH3AP50213 366 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 CACNA2D1P54289 1103 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 BCAT1P54687 386 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 GSCP56915 257 aaPredicted RBP7.88□□□□□ -1.15
CLDN1-202ENST00000490800 ZXDBP98169 803 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 PTSQ03393 145 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 SPEM2Q0P670 501 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 GRSF1Q12849 480 aaKnown RBP eCLIP7.88□□□□□ -1.15
CLDN1-202ENST00000490800 PUM1Q14671 1186 aaKnown RBP eCLIP7.88□□□□□ -1.15
CLDN1-202ENST00000490800 PDGFRLQ15198 375 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 ZNF77Q15935 545 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 TMEM196Q5HYL7 178 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 MEI1Q5TIA1 1274 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 NAIF1Q69YI7 327 aaPredicted RBP7.88□□□□□ -1.15
CLDN1-202ENST00000490800 C11orf63Q6NUN7 778 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 PMF1Q6P1K2 205 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 DNAJC24Q6P3W2 148 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 Q6ZNB5 142 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 PAQR9Q6ZVX9 377 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 DGLUCYQ7Z3D6 616 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 DAAM2Q86T65 1068 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 NT5DC3Q86UY8 548 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 LONP2Q86WA8 852 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 XYLT1Q86Y38 959 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 CPNE8Q86YQ8 564 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 SYCE1Q8N0S2 351 aa7.88□□□□□ -1.15
CLDN1-202ENST00000490800 GPR161Q8N6U8 529 aaKnown RBP7.88□□□□□ -1.15
CLDN1-202ENST00000490800 MSANTD4Q8NCY6 345 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms