RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 LGI2Q8N0V4 545 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 CFAP52Q8N1V2 620 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 ZNF606Q8WXB4 792 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 ZCCHC14Q8WYQ9 949 aaKnown RBP20.43■□□□□ 0.86
SREBF1-216ENST00000490796 GATA6Q92908 595 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 TTC17Q96AE7 1141 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 PRICKLE1Q96MT3 831 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-216ENST00000490796 CRACR2AQ9BSW2 395 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 POPDC2Q9HBU9 364 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 TM7SF3Q9NS93 570 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 KIAA1522Q9P206 1035 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-216ENST00000490796 SCML1Q9UN30 329 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 CNTN6Q9UQ52 1028 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 APOBEC2Q9Y235 224 aaKnown RBP20.43■□□□□ 0.86
SREBF1-216ENST00000490796 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-216ENST00000490796 E5RJQ4 531 aa20.42■□□□□ 0.86
SREBF1-216ENST00000490796 ZNF883P0CG24 379 aa20.42■□□□□ 0.86
SREBF1-216ENST00000490796 RPL34P49207 117 aaKnown RBP20.42■□□□□ 0.86
SREBF1-216ENST00000490796 CSNK1EP49674 416 aaKnown RBP20.42■□□□□ 0.86
SREBF1-216ENST00000490796 YWHAZP63104 245 aaKnown RBP20.42■□□□□ 0.86
SREBF1-216ENST00000490796 SUZ12Q15022 739 aaKnown RBP20.42■□□□□ 0.86
SREBF1-216ENST00000490796 ARHGAP44Q17R89 818 aa20.42■□□□□ 0.86
SREBF1-216ENST00000490796 DCAF6Q58WW2 860 aa20.42■□□□□ 0.86
SREBF1-216ENST00000490796 ZC3H12AQ5D1E8 599 aaKnown RBP20.42■□□□□ 0.86
SREBF1-216ENST00000490796 ADAT2Q7Z6V5 191 aaKnown RBP20.42■□□□□ 0.86
SREBF1-216ENST00000490796 DHX40Q8IX18 779 aaKnown RBP20.42■□□□□ 0.86
SREBF1-216ENST00000490796 ATP6V0D2Q8N8Y2 350 aa20.42■□□□□ 0.86
SREBF1-216ENST00000490796 RNF34Q969K3 372 aa20.42■□□□□ 0.86
SREBF1-216ENST00000490796 SLC39A13Q96H72 371 aa20.42■□□□□ 0.86
SREBF1-216ENST00000490796 BTN2A3PQ96KV6 586 aa20.42■□□□□ 0.86
SREBF1-216ENST00000490796 SLC4A5Q9BY07 1137 aa20.42■□□□□ 0.86
SREBF1-216ENST00000490796 THAP9Q9H5L6 903 aa20.42■□□□□ 0.86
SREBF1-216ENST00000490796 FAM208BQ5VWN6 2430 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 FAM47DPA6NHR8 397 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 LUC7L3O95232 432 aaKnown RBP20.41■□□□□ 0.86
SREBF1-216ENST00000490796 TRUB2O95900 331 aaKnown RBP20.41■□□□□ 0.86
SREBF1-216ENST00000490796 FTH1P19P0C7X4 201 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 NNMTP40261 264 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 CDK17Q00537 523 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 TPD52L1Q16890 204 aaPredicted RBP20.41■□□□□ 0.86
SREBF1-216ENST00000490796 HNRNPA1L2Q32P51 320 aaKnown RBP20.41■□□□□ 0.86
SREBF1-216ENST00000490796 PITRM1Q5JRX3 1037 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 SYPL2Q5VXT5 272 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 RAP1GAP2Q684P5 730 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 LRSAM1Q6UWE0 723 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 GBP6Q6ZN66 633 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 RSPH9Q9H1X1 276 aaPredicted RBP20.41■□□□□ 0.86
SREBF1-216ENST00000490796 MTG2Q9H4K7 406 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 FAM204AQ9H8W3 233 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 IL21RQ9HBE5 538 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 FBXL12Q9NXK8 326 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 RWDD2AQ9UIY3 292 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 CABIN1Q9Y6J0 2220 aa20.41■□□□□ 0.86
SREBF1-216ENST00000490796 F5H5T6 163 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 PAPSS1O43252 624 aaPredicted RBP20.4■□□□□ 0.86
SREBF1-216ENST00000490796 SIN3BO75182 1162 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 SRPRAP08240 638 aaKnown RBP20.4■□□□□ 0.86
SREBF1-216ENST00000490796 ABCB4P21439 1286 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 TACR2P21452 398 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 CD27P26842 260 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 MMS22LQ6ZRQ5 1243 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 USP30Q70CQ3 517 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 RAB44Q7Z6P3 723 aaPredicted RBP20.4■□□□□ 0.86
SREBF1-216ENST00000490796 TMEM110Q86TL2 294 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 KDM1BQ8NB78 822 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 C1orf216Q8TAB5 229 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 RHBDD1Q8TEB9 315 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 BIRC7Q96CA5 298 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 NOX5Q96PH1 765 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 OMDQ99983 421 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 TMEM121BQ9BXQ6 578 aaPredicted RBP20.4■□□□□ 0.86
SREBF1-216ENST00000490796 PABPC3Q9H361 631 aaKnown RBP20.4■□□□□ 0.86
SREBF1-216ENST00000490796 TM9SF3Q9HD45 589 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.4■□□□□ 0.86
SREBF1-216ENST00000490796 PCOLCE2Q9UKZ9 415 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 ERVW-1Q9UQF0 538 aa20.4■□□□□ 0.86
SREBF1-216ENST00000490796 FNDC3AQ9Y2H6 1198 aaKnown RBP20.4■□□□□ 0.86
SREBF1-216ENST00000490796 SYNJ2BP-COX16A0A087WUM0 186 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 TARSL2A2RTX5 802 aaKnown RBP20.39■□□□□ 0.85
SREBF1-216ENST00000490796 FLRT2O43155 660 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 SLC2A3P11169 496 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 MTIF2P46199 727 aaKnown RBP20.39■□□□□ 0.85
SREBF1-216ENST00000490796 GRIA4P48058 902 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 SNX16P57768 344 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 ECT2LQ008S8 904 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 PDCLQ13371 301 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 CAMK4Q16566 473 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 EXOC3L4Q17RC7 722 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 KIF19Q2TAC6 998 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 FSCBQ5H9T9 825 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 GJB7Q6PEY0 223 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 TRIM65Q6PJ69 517 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 PNPLA1Q8N8W4 532 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 MYEOVQ96EZ4 313 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 LMLNQ96KR4 655 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 CDC6Q99741 560 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 OSGEPQ9NPF4 335 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 COX16Q9P0S2 106 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 KIAA1468Q9P260 1216 aa20.39■□□□□ 0.85
SREBF1-216ENST00000490796 APEX2Q9UBZ4 518 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms