RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 SLC23A3Q6PIS1 610 aa32.45■■■□□ 2.79
LDB1-204ENST00000490751 MMS22LQ6ZRQ5 1243 aa32.45■■■□□ 2.79
LDB1-204ENST00000490751 NOP9Q86U38 636 aaKnown RBP32.45■■■□□ 2.79
LDB1-204ENST00000490751 ZDHHC17Q8IUH5 632 aa32.45■■■□□ 2.79
LDB1-204ENST00000490751 TOE1Q96GM8 510 aaKnown RBP32.45■■■□□ 2.79
LDB1-204ENST00000490751 ZNF419Q96HQ0 510 aaPredicted RBP32.45■■■□□ 2.79
LDB1-204ENST00000490751 NCOR2Q9Y618 2525 aa32.45■■■□□ 2.78
LDB1-204ENST00000490751 H0Y626 953 aa32.44■■■□□ 2.78
LDB1-204ENST00000490751 NOS2P35228 1153 aa32.44■■■□□ 2.78
LDB1-204ENST00000490751 CSKP41240 450 aa32.44■■■□□ 2.78
LDB1-204ENST00000490751 NME3Q13232 169 aa32.44■■■□□ 2.78
LDB1-204ENST00000490751 FKBP15Q5T1M5 1219 aa32.44■■■□□ 2.78
LDB1-204ENST00000490751 TTC17Q96AE7 1141 aa32.44■■■□□ 2.78
LDB1-204ENST00000490751 PRMT1Q99873 361 aaKnown RBP32.44■■■□□ 2.78
LDB1-204ENST00000490751 FAM170AA1A519 330 aa32.43■■■□□ 2.78
LDB1-204ENST00000490751 CFIP05156 583 aa32.43■■■□□ 2.78
LDB1-204ENST00000490751 MYL5Q02045 173 aa32.43■■■□□ 2.78
LDB1-204ENST00000490751 DUOXA1Q1HG43 343 aa32.43■■■□□ 2.78
LDB1-204ENST00000490751 PITRM1Q5JRX3 1037 aa32.43■■■□□ 2.78
LDB1-204ENST00000490751 CCDC183Q5T5S1 534 aa32.43■■■□□ 2.78
LDB1-204ENST00000490751 EPS8L1Q8TE68 723 aa32.43■■■□□ 2.78
LDB1-204ENST00000490751 FOXJ1Q92949 421 aa32.43■■■□□ 2.78
LDB1-204ENST00000490751 ADAMTS9Q9P2N4 1935 aa32.42■■■□□ 2.78
LDB1-204ENST00000490751 CDX4O14627 284 aaPredicted RBP32.42■■■□□ 2.78
LDB1-204ENST00000490751 ASLP04424 464 aa32.42■■■□□ 2.78
LDB1-204ENST00000490751 OXTRP30559 389 aa32.42■■■□□ 2.78
LDB1-204ENST00000490751 DAB2IPQ5VWQ8 1189 aa32.42■■■□□ 2.78
LDB1-204ENST00000490751 ERICH1Q86X53 443 aa32.42■■■□□ 2.78
LDB1-204ENST00000490751 RGL4Q8IZJ4 473 aa32.42■■■□□ 2.78
LDB1-204ENST00000490751 CEP76Q8TAP6 659 aa32.42■■■□□ 2.78
LDB1-204ENST00000490751 C18orf8Q96DM3 657 aa32.42■■■□□ 2.78
LDB1-204ENST00000490751 MYO19Q96H55 970 aa32.42■■■□□ 2.78
LDB1-204ENST00000490751 GPR174Q9BXC1 333 aa32.42■■■□□ 2.78
LDB1-204ENST00000490751 PRSS16Q9NQE7 514 aa32.42■■■□□ 2.78
LDB1-204ENST00000490751 FAM207AQ9NSI2 230 aaPredicted RBP32.42■■■□□ 2.78
LDB1-204ENST00000490751 KIAA1522Q9P206 1035 aaPredicted RBP32.42■■■□□ 2.78
LDB1-204ENST00000490751 M0QYT0 321 aa32.41■■■□□ 2.78
LDB1-204ENST00000490751 IGLV3-19P01714 112 aa32.41■■■□□ 2.78
LDB1-204ENST00000490751 MMEP08473 750 aa32.41■■■□□ 2.78
LDB1-204ENST00000490751 ENGP17813 658 aa32.41■■■□□ 2.78
LDB1-204ENST00000490751 MATKP42679 507 aa32.41■■■□□ 2.78
LDB1-204ENST00000490751 GABRB2P47870 512 aa32.41■■■□□ 2.78
LDB1-204ENST00000490751 COPB1P53618 953 aaKnown RBP32.41■■■□□ 2.78
LDB1-204ENST00000490751 RNASE9P60153 205 aaKnown RBP32.41■■■□□ 2.78
LDB1-204ENST00000490751 POLR2FP61218 127 aaKnown RBP32.41■■■□□ 2.78
LDB1-204ENST00000490751 ST8SIA6P61647 398 aa32.41■■■□□ 2.78
LDB1-204ENST00000490751 OTUD1Q5VV17 481 aaPredicted RBP32.41■■■□□ 2.78
LDB1-204ENST00000490751 RABEPKQ7Z6M1 372 aa32.41■■■□□ 2.78
LDB1-204ENST00000490751 CIR1Q86X95 450 aaPredicted RBP32.41■■■□□ 2.78
LDB1-204ENST00000490751 FBRSQ9HAH7 460 aa32.41■■■□□ 2.78
LDB1-204ENST00000490751 SUN2Q9UH99 717 aa32.41■■■□□ 2.78
LDB1-204ENST00000490751 SLC6A14Q9UN76 642 aa32.41■■■□□ 2.78
LDB1-204ENST00000490751 GFPT2O94808 682 aa32.4■■■□□ 2.78
LDB1-204ENST00000490751 MOCS3O95396 460 aa32.4■■■□□ 2.78
LDB1-204ENST00000490751 LSM8O95777 96 aaKnown RBP32.4■■■□□ 2.78
LDB1-204ENST00000490751 RABGAP1LQ5R372 815 aa32.4■■■□□ 2.78
LDB1-204ENST00000490751 SYCP2LQ5T4T6 812 aa32.4■■■□□ 2.78
LDB1-204ENST00000490751 FAM102AQ5T9C2 384 aaPredicted RBP32.4■■■□□ 2.78
LDB1-204ENST00000490751 XYLT1Q86Y38 959 aa32.4■■■□□ 2.78
LDB1-204ENST00000490751 ANKRD20A12PQ8NF67 263 aa32.4■■■□□ 2.78
LDB1-204ENST00000490751 MRGPRX3Q96LB0 322 aa32.4■■■□□ 2.78
LDB1-204ENST00000490751 NPY6RQ99463 290 aa32.4■■■□□ 2.78
LDB1-204ENST00000490751 MTG2Q9H4K7 406 aa32.4■■■□□ 2.78
LDB1-204ENST00000490751 NLRC4Q9NPP4 1024 aa32.4■■■□□ 2.78
LDB1-204ENST00000490751 FSCN3Q9NQT6 498 aa32.4■■■□□ 2.78
LDB1-204ENST00000490751 RRN3Q9NYV6 651 aa32.4■■■□□ 2.78
LDB1-204ENST00000490751 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP32.4■■■□□ 2.78
LDB1-204ENST00000490751 CNOT1A5YKK6 2376 aaKnown RBP32.39■■■□□ 2.78
LDB1-204ENST00000490751 EPHB6O15197 1021 aa32.39■■■□□ 2.78
LDB1-204ENST00000490751 ADRB1P08588 477 aa32.39■■■□□ 2.78
LDB1-204ENST00000490751 SERPINF2P08697 491 aa32.39■■■□□ 2.78
LDB1-204ENST00000490751 MAPK8P45983 427 aa32.39■■■□□ 2.78
LDB1-204ENST00000490751 PLEKHG6Q3KR16 790 aa32.39■■■□□ 2.78
LDB1-204ENST00000490751 TTC39BQ5VTQ0 682 aaPredicted RBP32.39■■■□□ 2.78
LDB1-204ENST00000490751 FBXL22Q6P050 247 aa32.39■■■□□ 2.78
LDB1-204ENST00000490751 CCAR2Q8N163 923 aaKnown RBP32.39■■■□□ 2.78
LDB1-204ENST00000490751 NUP58Q9BVL2 599 aa32.39■■■□□ 2.78
LDB1-204ENST00000490751 ADAM33Q9BZ11 813 aa32.39■■■□□ 2.78
LDB1-204ENST00000490751 CAPN10Q9HC96 672 aa32.39■■■□□ 2.78
LDB1-204ENST00000490751 LIMA1Q9UHB6 759 aaKnown RBP32.39■■■□□ 2.78
LDB1-204ENST00000490751 NOCTQ9UK39 431 aaKnown RBP32.39■■■□□ 2.78
LDB1-204ENST00000490751 STAP1Q9ULZ2 295 aa32.39■■■□□ 2.78
LDB1-204ENST00000490751 SIK3Q9Y2K2 1263 aa32.39■■■□□ 2.78
LDB1-204ENST00000490751 PCDH15Q96QU1 1955 aa32.39■■■□□ 2.78
LDB1-204ENST00000490751 MEI4A8MW99 385 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 MAOBP27338 520 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 SCNN1AP37088 669 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 CTSOP43234 321 aaPredicted RBP32.38■■■□□ 2.77
LDB1-204ENST00000490751 SULT1E1P49888 294 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 RPS14P62263 151 aaKnown RBP32.38■■■□□ 2.77
LDB1-204ENST00000490751 NOMO3P69849 1222 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 MTA1Q13330 715 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 C2CD6Q53TS8 623 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 WDR45BQ5MNZ6 344 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 NAA35Q5VZE5 725 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 FAM124AQ86V42 546 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 APCDD1Q8J025 514 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 MSANTD4Q8NCY6 345 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 SLC20A1Q8WUM9 679 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 RPRD1AQ96P16 312 aaPredicted RBP32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms