RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 GFRA2O00451 464 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 NFATC1O95644 943 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 FGGP02679 453 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 CD48P09326 243 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 PSMC3P17980 439 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 IL4RP24394 825 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 VIPR2P41587 438 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 NR2C2P49116 596 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 MAPKAPK2P49137 400 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 CDH4P55283 916 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 OXCT1P55809 520 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 FCHO2Q0JRZ9 810 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 LONRF2Q1L5Z9 754 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 FAM72AQ5TYM5 149 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 SLC9A4Q6AI14 798 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 PTCRAQ6ISU1 281 aaPredicted RBP13.65□□□□□ -0.22
SNX12-205ENST00000490561 FAM72DQ6L9T8 149 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 POTEHQ6S545 545 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 TMCO3Q6UWJ1 677 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 C14orf80Q86SX3 495 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 FAM72BQ86X60 149 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 ZNF683Q8IZ20 524 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 ZDHHC14Q8IZN3 488 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 COG1Q8WTW3 980 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 ATP2A3Q93084 1043 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 WBP2Q969T9 261 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 TMA16Q96EY4 203 aaKnown RBP13.65□□□□□ -0.22
SNX12-205ENST00000490561 ARHGEF4Q9NR80 690 aa13.65□□□□□ -0.22
SNX12-205ENST00000490561 DUS2Q9NX74 493 aaKnown RBP13.65□□□□□ -0.22
SNX12-205ENST00000490561 GOLGA6L7A0A1B0GV03 622 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 ANHXE9PGG2 379 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 DCLK1O15075 740 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 CST8O60676 142 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 ADH1CP00326 375 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 ERCC2P18074 760 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 SLC6A4P31645 630 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 NR1H3Q13133 447 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 HTR4Q13639 388 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 KAZNQ674X7 775 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 TANGO2Q6ICL3 276 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 CREG2Q8IUH2 290 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 RTL3Q8N8U3 475 aaKnown RBP13.64□□□□□ -0.23
SNX12-205ENST00000490561 MNS1Q8NEH6 495 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 PCDH19Q8TAB3 1148 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 TMEM248Q9NWD8 314 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 MARK1Q9P0L2 795 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 IGSF9Q9P2J2 1179 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 SNX10Q9Y5X0 201 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 MRFAP1Q9Y605 127 aa13.64□□□□□ -0.23
SNX12-205ENST00000490561 DOCK6Q96HP0 2047 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.63□□□□□ -0.23
SNX12-205ENST00000490561 APOC4-APOC2K7ER74 178 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 CHADO15335 359 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 NCAM2O15394 837 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 APOC2P02655 101 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 KRT10P13645 584 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 AMPD1P23109 780 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 ETFBP38117 255 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 MMRN1Q13201 1228 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 KLF1Q13351 362 aaPredicted RBP13.63□□□□□ -0.23
SNX12-205ENST00000490561 ZNF177Q13360 481 aaPredicted RBP13.63□□□□□ -0.23
SNX12-205ENST00000490561 PAFAH1B3Q15102 231 aaKnown RBP13.63□□□□□ -0.23
SNX12-205ENST00000490561 C6orf118Q5T5N4 469 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 RFWD3Q6PCD5 774 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 VITQ6UXI7 678 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 ZNF783Q6ZMS7 281 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 SETD3Q86TU7 594 aaPredicted RBP13.63□□□□□ -0.23
SNX12-205ENST00000490561 NLRP14Q86W24 1093 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 LRRC49Q8IUZ0 686 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 CPA6Q8N4T0 437 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 PQLC3Q8N755 202 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 CEP112Q8N8E3 955 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 DDI1Q8WTU0 396 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 IRF7Q92985 503 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 IGSF8Q969P0 613 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 RSPRY1Q96DX4 576 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 RPGRIP1Q96KN7 1286 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 CAPZA3Q96KX2 299 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 TRMT61BQ9BVS5 477 aaKnown RBP13.63□□□□□ -0.23
SNX12-205ENST00000490561 HEMGNQ9BXL5 484 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 BRD8Q9H0E9 1235 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 SPHK2Q9NRA0 654 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 PRKAG3Q9UGI9 489 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 NEU3Q9UQ49 428 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 CDH23Q9H251 3354 aa13.63□□□□□ -0.23
SNX12-205ENST00000490561 C2CD4DB7Z1M9 353 aa13.62□□□□□ -0.23
SNX12-205ENST00000490561 CCDC188H7C350 402 aa13.62□□□□□ -0.23
SNX12-205ENST00000490561 ZNF185O15231 689 aa13.62□□□□□ -0.23
SNX12-205ENST00000490561 TSPAN3O60637 253 aa13.62□□□□□ -0.23
SNX12-205ENST00000490561 TBL1XO60907 577 aa13.62□□□□□ -0.23
SNX12-205ENST00000490561 PENKP01210 267 aaPredicted RBP13.62□□□□□ -0.23
SNX12-205ENST00000490561 MX2P20592 715 aa13.62□□□□□ -0.23
SNX12-205ENST00000490561 GGCXP38435 758 aa13.62□□□□□ -0.23
SNX12-205ENST00000490561 NDST2P52849 883 aa13.62□□□□□ -0.23
SNX12-205ENST00000490561 GAD2Q05329 585 aa13.62□□□□□ -0.23
SNX12-205ENST00000490561 EML3Q32P44 896 aa13.62□□□□□ -0.23
SNX12-205ENST00000490561 RNF43Q68DV7 783 aa13.62□□□□□ -0.23
SNX12-205ENST00000490561 NCBP2-AS2Q69YL0 99 aa13.62□□□□□ -0.23
SNX12-205ENST00000490561 AADACL2Q6P093 401 aa13.62□□□□□ -0.23
SNX12-205ENST00000490561 PARM1Q6UWI2 310 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms