RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 SYT13Q7L8C5 426 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 RFX6Q8HWS3 928 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 RHPN2Q8IUC4 686 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 EXOC8Q8IYI6 725 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 ADGRF4Q8IZF3 695 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 FSIP1Q8NA03 581 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 CSGALNACT1Q8TDX6 532 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 THAP4Q8WY91 577 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 TBC1D20Q96BZ9 403 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 PRSS22Q9GZN4 317 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 OSBPL5Q9H0X9 879 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 PDE11AQ9HCR9 933 aa5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB1P38-201ENST00000490557 CYP3A7-CYP3A51PA0A087WV96 503 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 CYP2D7A0A087X1C5 515 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 SLC22A23A1A5C7 686 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 PIP5K1CO60331 668 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 SGPL1O95470 568 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 CYP3A7P24462 503 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 ADD2P35612 726 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 MCM2P49736 904 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 ARL4CP56559 192 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 PDCLQ13371 301 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 CUL4BQ13620 913 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 INO80DQ53TQ3 878 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 ZNF575Q86XF7 245 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 SMC5Q8IY18 1101 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 CLEC4CQ8WTT0 213 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 P2RY11Q96G91 374 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 ISCA1Q9BUE6 129 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 SCNM1Q9BWG6 230 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 SLC25A13Q9UJS0 675 aa5.45□□□□□ -1.54
HMGB1P38-201ENST00000490557 DPPA5A6NC42 116 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 BCAR3O75815 825 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 HEXIM1O94992 359 aaKnown RBP5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 RFPL3SP0C7P2 107 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 IGFBP2P18065 325 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 HOXA7P31268 230 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 PAPOLAP51003 745 aaKnown RBP5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 ID2Q02363 134 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 BIRC3Q13489 604 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 DAZAP2Q15038 168 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 MORN5Q5VZ52 161 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 ZNF626Q68DY1 528 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 LDHAL6AQ6ZMR3 332 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 ZNF793Q6ZN11 406 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 C2CD5Q86YS7 1000 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 ANKRD18AQ8IVF6 992 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 FTSJ3Q8IY81 847 aaKnown RBP5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 ADGRF3Q8IZF5 1079 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 BCAS4Q8TDM0 211 aa5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 ZSCAN31Q96LW9 406 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P38-201ENST00000490557 CGB1A6NKQ9 187 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 UGDHO60701 494 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 NFATC1O95644 943 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 TFRCP02786 760 aaKnown RBP5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 RXRAP19793 462 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 SOX2P48431 317 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 PLCD1P51178 756 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 ACTR2P61160 394 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 TRIP6Q15654 476 aaKnown RBP5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 LRIG3Q6UXM1 1119 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 FAM57BQ71RH2 274 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 ANKS1BQ7Z6G8 1248 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 MOGAT3Q86VF5 341 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 ZNF354CQ86Y25 554 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 ANKRD13BQ86YJ7 626 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 TMEM57Q8N5G2 664 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 ENDOVQ8N8Q3 282 aaKnown RBP5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 SLC2A12Q8TD20 617 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 DENND1AQ8TEH3 1009 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 ZFPM2Q8WW38 1151 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 KCNJ9Q92806 393 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 ARRDC3Q96B67 414 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 SDCCAG3Q96C92 435 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 SIGLEC11Q96RL6 698 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 SLC29A3Q9BZD2 475 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 CHODLQ9H9P2 273 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 G6PC2Q9NQR9 355 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 ITM2CQ9NQX7 267 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 LZTS1Q9Y250 596 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 TNFSF13BQ9Y275 285 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 ZNF804BA4D1E1 1349 aa5.43□□□□□ -1.54
HMGB1P38-201ENST00000490557 C2CD4BA6NLJ0 364 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 E5RJQ4 531 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 F8W810 466 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 GRM8O00222 908 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 TP73O15350 636 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 FAM155BO75949 473 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 CDK4P11802 303 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 CCT5P48643 541 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 OAZ1P54368 228 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 B4GALNT1Q00973 533 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 PPFIA1Q13136 1202 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 ALKBH1Q13686 389 aaKnown RBP5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 SMAD1Q15797 465 aaKnown RBP5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 EARS2Q5JPH6 523 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms