RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 DGKHQ86XP1 1220 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 DDX42Q86XP3 938 aaKnown RBP eCLIP3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 PTRH1Q86Y79 214 aaKnown RBP3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 LMNTD2Q8IXW0 634 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 IL31RAQ8NI17 732 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 SLC30A5Q8TAD4 765 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 FAM81AQ8TBF8 368 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 TEKT4Q8WW24 435 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 CKAP2Q8WWK9 683 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 RFFLQ8WZ73 363 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 TBC1D5Q92609 795 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 PRCCQ92733 491 aaPredicted RBP3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 GRAMD1AQ96CP6 724 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 KLHL29Q96CT2 875 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 AJUBAQ96IF1 538 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 ZNF333Q96JL9 665 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 RUNDC3BQ96NL0 473 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 CLUHP3Q96NS8 147 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 SERPINB12Q96P63 405 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 RAB3IPQ96QF0 476 aaPredicted RBP3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 MTMR9Q96QG7 549 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 NAP1L3Q99457 506 aaPredicted RBP3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 TSC22D3Q99576 134 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 TSG101Q99816 390 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 ELAC2Q9BQ52 826 aaKnown RBP3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 LZTS2Q9BRK4 669 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 ERP44Q9BS26 406 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 LSM14BQ9BX40 385 aaKnown RBP3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 SPZ1Q9BXG8 430 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 PACSIN1Q9BY11 444 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 YIPF3Q9GZM5 350 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 ZMYND12Q9H0C1 365 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 DPH5Q9H2P9 285 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 MMRN2Q9H8L6 949 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 TCP11L1Q9NUJ3 509 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 TXLNGQ9NUQ3 528 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 BARHL2Q9NY43 387 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 EURLQ9NYK6 297 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 CYP39A1Q9NYL5 469 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 AMACRQ9UHK6 382 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 MAD2L2Q9UI95 211 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 PACSIN2Q9UNF0 486 aaPredicted RBP3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 TBC1D30Q9Y2I9 924 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 LRCH1Q9Y2L9 728 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 SH3BP1Q9Y3L3 701 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 PCDHA9Q9Y5H5 950 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 PTCH2Q9Y6C5 1203 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 SLC4A7Q9Y6M7 1214 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 PTPRSQ13332 1948 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 PFASO15067 1338 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 ZNF536O15090 1300 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 ADGRA3Q8IWK6 1321 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 KIAA1671Q9BY89 1806 aa3.63□□□□□ -1.83
CRNKL1-203ENST00000490258 GBF1Q92538 1859 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 LRRD1A4D1F6 860 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 ENO4A6NNW6 628 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 A8MUI8 341 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 MIF4GDA9UHW6 222 aaKnown RBP3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 NPIPB8E9PQR5 432 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 hCG_1984214I3L0E3 225 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 MATN2O00339 956 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 PODXLO00592 558 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 RASGRF2O14827 1237 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 TP73O15350 636 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 SLC16A3O15427 465 aaKnown RBP3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 RGS16O15492 202 aaPredicted RBP3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 HIP1RO75146 1068 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 PHF2O75151 1096 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 ATP2C2O75185 946 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 COQ9O75208 318 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 RNF8O76064 485 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 MTA2O94776 668 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 LMNAP02545 664 aaKnown RBP3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 AFPP02771 609 aaKnown RBP3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 HLA-DOAP06340 250 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 H2AFZP0C0S5 128 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 GM2AP17900 193 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 VCAM1P19320 739 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 MUTP22033 750 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 CTNNA2P26232 953 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 SMARCA1P28370 1054 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 HOXA13P31271 388 aaPredicted RBP3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 CHRNA3P32297 505 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 GNALP38405 381 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 PEX19P40855 299 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 IL12RB1P42701 662 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 MAGEA8P43361 318 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 PEX5P50542 639 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 TUBP50607 506 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 HMGCS2P54868 508 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 SH3BGRP55822 239 aaPredicted RBP3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 ZNF280AP59817 542 aaPredicted RBP3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 POLR2FP61218 127 aaKnown RBP3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 DR1Q01658 176 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 DPTQ07507 201 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 KLC1Q07866 573 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 MGAT5Q09328 741 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 KLHL30Q0D2K2 578 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 FSTL1Q12841 308 aa3.62□□□□□ -1.83
CRNKL1-203ENST00000490258 FOXD4Q12950 439 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms