RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 TPSD1Q9BZJ3 242 aa6.98□□□□□ -1.29
TM9SF3-206ENST00000490192 GLOD4Q9HC38 313 aa6.98□□□□□ -1.29
TM9SF3-206ENST00000490192 PDE7BQ9NP56 450 aa6.98□□□□□ -1.29
TM9SF3-206ENST00000490192 KCNE5Q9UJ90 142 aa6.98□□□□□ -1.29
TM9SF3-206ENST00000490192 OSGIN2Q9Y236 505 aa6.98□□□□□ -1.29
TM9SF3-206ENST00000490192 COPG1Q9Y678 874 aaKnown RBP6.98□□□□□ -1.29
TM9SF3-206ENST00000490192 A0A1W2PQ09 198 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 LIPT2A6NK58 231 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 PSMD9O00233 223 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 ZNF213O14771 459 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 SEC14L2O76054 403 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 CXCR5P32302 372 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 MSX2P35548 267 aaPredicted RBP6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 MVDP53602 400 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 PSMC6P62333 389 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 TMEM115Q12893 351 aaPredicted RBP6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 FOXL1Q12952 345 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 PRPF4BQ13523 1007 aaKnown RBP6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 PUM1Q14671 1186 aaKnown RBP eCLIP6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 FAM187BQ17R55 369 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 GEN1Q17RS7 908 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 BMP2KLQ5H9B9 411 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 SH2D4BQ5SQS7 431 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 LRRC55Q6ZSA7 311 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 ARHGEF18Q6ZSZ5 1173 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 KDELC2Q7Z4H8 507 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 GALNTL5Q7Z4T8 443 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 ZNF808Q8N4W9 903 aaPredicted RBP6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 MIEF2Q96C03 454 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 PRR11Q96HE9 360 aaPredicted RBP6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 SPATA17Q96L03 361 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 NPAS1Q99742 590 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 CLSTN3Q9BQT9 956 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 MAK16Q9BXY0 300 aaKnown RBP6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 TEX101Q9BY14 249 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 SAP30LQ9HAJ7 183 aa6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 ZNF70Q9UC06 446 aaPredicted RBP6.97□□□□□ -1.29
TM9SF3-206ENST00000490192 FAM237BA0A1B0GVD1 139 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 A1L4Q6 167 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 MYO1GB0I1T2 1018 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 UBE2CO00762 179 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 METTL18O95568 372 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 ARSAP15289 507 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 GATA3P23771 443 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 AVPR2P30518 371 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 MCM5P33992 734 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 HNF1BP35680 557 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 IGHMBP2P38935 993 aaKnown RBP6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 PBX3P40426 434 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 RABGGTBP53611 331 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 EIF3BP55884 814 aaKnown RBP6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 PPP2CBP62714 309 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 PPP2CAP67775 309 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 ARHGAP8P85298 464 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 EIF2B5Q13144 721 aaKnown RBP6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 TTI2Q6NXR4 508 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 WDR93Q6P2C0 686 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 NCEH1Q6PIU2 408 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 SCML4Q8N228 414 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 NOC3LQ8WTT2 800 aaKnown RBP6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 SOCS4Q8WXH5 440 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 KLHL29Q96CT2 875 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 EHD2Q9NZN4 543 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 MPP6Q9NZW5 540 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 KLQ9UEF7 1012 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 SLCO3A1Q9UIG8 710 aa6.96□□□□□ -1.3
TM9SF3-206ENST00000490192 TEX13CA0A0J9YWL9 993 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 A0A1W2PQM1 296 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 NPIPB13A6NJU9 1138 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 NPIPB5A8MRT5 1133 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 NPIPB4C9JG80 1138 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 DIRC3C9JPN6 131 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 PER2O15055 1255 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 SPRY2O43597 315 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 PRICKLE3O43900 615 aaPredicted RBP6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 NOBOXO60393 691 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 HNRNPCL1O60812 293 aaKnown RBP6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 RPS6KA4O75676 772 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 PDE8BO95263 885 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 ALDOAP04075 364 aaKnown RBP6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 CFIP05156 583 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 EIF2S1P05198 315 aaKnown RBP6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 CXADRP78310 365 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 DEUP1Q05D60 604 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 CYP2A13Q16696 494 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 C1orf141Q5JVX7 400 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 PLEKHS1Q5SXH7 462 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 B3GNTL1Q67FW5 361 aaPredicted RBP6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 NUGGCQ68CJ6 796 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 DPY19L3Q6ZPD9 716 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 FAM43BQ6ZT52 329 aaPredicted RBP6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 GSPT2Q8IYD1 628 aaKnown RBP6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 TMEM132CQ8N3T6 1108 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 PLD5Q8N7P1 536 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 ARHGEF2Q92974 986 aaKnown RBP6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 R3HDM4Q96D70 268 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 RNF31Q96EP0 1072 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 KLHL15Q96M94 604 aa6.95□□□□□ -1.3
TM9SF3-206ENST00000490192 CMTM3Q96MX0 182 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms