RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 KIF1BO60333 1816 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 TRIM64CA6NLI5 447 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 TBKBP1A7MCY6 615 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 STARD3NLO95772 234 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 JUNP05412 331 aaKnown RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 SNRNP70P08621 437 aaKnown RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 ALADP13716 330 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 TFEBP19484 476 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 SERPINA4P29622 427 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 ADSSP30520 456 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 FAM3BP58499 235 aaPredicted RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 YPEL5P62699 121 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 FBLN7Q53RD9 439 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 C9orf152Q5JTZ5 239 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 KIAA1324Q6UXG2 1013 aaKnown RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 MSANTD1Q6ZTZ1 278 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 ZC3H18Q86VM9 953 aaKnown RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 RNF168Q8IYW5 571 aaPredicted RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 TTC39CQ8N584 583 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 C9orf43Q8TAL5 461 aaPredicted RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 UTP4Q969X6 686 aaKnown RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 ADAMTS10Q9H324 1103 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 PLEKHA2Q9HB19 425 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 PDRG1Q9NUG6 133 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 LIN7CQ9NUP9 197 aaKnown RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 SPATA6Q9NWH7 488 aaPredicted RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 POGKQ9P215 609 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 TMEM5Q9Y2B1 443 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 LIPGQ9Y5X9 500 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 TMEM131LA2VDJ0 1609 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 ZNF335Q9H4Z2 1342 aaPredicted RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 USP54Q70EL1 1684 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 FEZF1A0PJY2 475 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 CDC14CA4D256 554 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 C5orf52A6NGY3 159 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 C16orf96A6NNT2 1141 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 FCHO1O14526 889 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 CPLX1O14810 134 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 DDHD2O94830 711 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 UNC5CO95185 931 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 TPM2P07951 284 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 ATXN1LP0C7T5 689 aaKnown RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 COX7A2P14406 83 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 THPOP40225 353 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 AFF3P51826 1226 aaKnown RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 GRIN1Q05586 938 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 MAP3K12Q12852 859 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 SKIDA1Q1XH10 827 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 DCAF17Q5H9S7 520 aaPredicted RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 MPP7Q5T2T1 576 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 CCBE1Q6UXH8 406 aaPredicted RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 ETV3LQ6ZN32 361 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 Q6ZUG5 572 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 DTX2Q86UW9 622 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 RHOT1Q8IXI2 618 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 TMIEQ8NEW7 156 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 NPIPB3Q92617 1050 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 LIN37Q96GY3 246 aaPredicted RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 GPHA2Q96T91 129 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 DKK3Q9UBP4 350 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 DNAJB11Q9UBS4 358 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 PCDHGB5Q9Y5G0 923 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 FAM169AQ9Y6X4 670 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 ADGRL1O94910 1474 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 RPRD2Q5VT52 1461 aaKnown RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 PRAG1Q86YV5 1406 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 TRPM1Q7Z4N2 1603 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 A0A1W2PS29 197 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 KPNA7A9QM74 516 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 LPXNO60711 386 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 ALDH1A2O94788 518 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 KAT7O95251 611 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 CD1AP06126 327 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 SLC3A2P08195 630 aaKnown RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 SYN1P17600 705 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 ATP5F1P24539 256 aaPredicted RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 HNF4AP41235 474 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 TDO2P48775 406 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 CENPAP49450 140 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 POLGP54098 1239 aaPredicted RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 ADARP55265 1226 aaKnown RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 KCNMA1Q12791 1236 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 PPIGQ13427 754 aaKnown RBP eCLIP3.16□□□□□ -1.98e-13■□□□□ 11.1
UBXN4-208ENST00000490163 HLXQ14774 488 aaPredicted RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 TWISTNBQ3B726 338 aaPredicted RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 DNAJC21Q5F1R6 531 aaKnown RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 KIAA0895LQ68EN5 471 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 SFRP4Q6FHJ7 346 aaPredicted RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 TRAT1Q6PIZ9 186 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 UNC5DQ6UXZ4 953 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 MED25Q71SY5 747 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 ARHGAP12Q8IWW6 846 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 RFWD2Q8NHY2 731 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 FER1L6-AS2Q96M78 137 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 RNF26Q9BY78 433 aaPredicted RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 NUAK2Q9H093 628 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 INTS2Q9H0H0 1204 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms