RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 C6orf118Q5T5N4 469 aa12.23□□□□□ -0.45
FDPS-215ENST00000490140 PIK3R6Q5UE93 754 aa12.23□□□□□ -0.45
FDPS-215ENST00000490140 LCLAT1Q6UWP7 414 aa12.23□□□□□ -0.45
FDPS-215ENST00000490140 BHLHA9Q7RTU4 235 aa12.23□□□□□ -0.45
FDPS-215ENST00000490140 ZNF366Q8N895 744 aa12.23□□□□□ -0.45
FDPS-215ENST00000490140 OR2T34Q8NGX1 318 aa12.23□□□□□ -0.45
FDPS-215ENST00000490140 FIBINQ8TAL6 211 aa12.23□□□□□ -0.45
FDPS-215ENST00000490140 GDF3Q9NR23 364 aa12.23□□□□□ -0.45
FDPS-215ENST00000490140 TOR4AQ9NXH8 423 aa12.23□□□□□ -0.45
FDPS-215ENST00000490140 FBXL12Q9NXK8 326 aa12.23□□□□□ -0.45
FDPS-215ENST00000490140 TMEM131Q92545 1883 aa12.23□□□□□ -0.45
FDPS-215ENST00000490140 SMG1Q96Q15 3661 aaKnown RBP12.23□□□□□ -0.45
FDPS-215ENST00000490140 COL5A1P20908 1838 aaPredicted RBP12.23□□□□□ -0.45
FDPS-215ENST00000490140 EDDM13A0A1B0GTR0 161 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 A0A1W2PPC4 97 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 TARSL2A2RTX5 802 aaKnown RBP12.22□□□□□ -0.45
FDPS-215ENST00000490140 FAM47DPA6NHR8 397 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 H0Y8X5 98 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 M0QYV0 167 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 RNASEH2AO75792 299 aaKnown RBP12.22□□□□□ -0.45
FDPS-215ENST00000490140 ZNF202O95125 648 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 APOEP02649 317 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 ITGAVP06756 1048 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 NUDT1P36639 197 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 PPP1R2P41236 205 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 NUCB2P80303 420 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 CST6Q15828 149 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 CBWD6Q4V339 395 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 COBLL1Q53SF7 1204 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 CCDC157Q569K6 752 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 CBWD3Q5JTY5 395 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 CBWD5Q5RIA9 395 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 TMEM270Q6UE05 265 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 TTC17Q96AE7 1141 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 HSFY1Q96LI6 401 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 NT5C1BQ96P26 610 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 GSDMAQ96QA5 445 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 ELF4Q99607 663 aaPredicted RBP12.22□□□□□ -0.45
FDPS-215ENST00000490140 AASDHPPTQ9NRN7 309 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 ADAMTS1Q9UHI8 967 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 TLR6Q9Y2C9 796 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 BTBD3Q9Y2F9 522 aa12.22□□□□□ -0.45
FDPS-215ENST00000490140 TP53BP1Q12888 1972 aaPredicted RBP12.21□□□□□ -0.45
FDPS-215ENST00000490140 GCN1Q92616 2671 aaKnown RBP12.21□□□□□ -0.45
FDPS-215ENST00000490140 A0A087WV48 116 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 A0A1B0GTQ1 180 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 GOLGA6L4A6NEF3 574 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 TRABD2BA6NFA1 517 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 TULP2O00295 520 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 CAPN9O14815 690 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 PSMA7O14818 248 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 CD38P28907 300 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 CD70P32970 193 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 CSKP41240 450 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 ABCG1P45844 678 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 CCR5P51681 352 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 OXCT1P55809 520 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 SULT2A1Q06520 285 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 SLC12A1Q13621 1099 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 ELAVL3Q14576 367 aaKnown RBP12.21□□□□□ -0.45
FDPS-215ENST00000490140 FAM133BQ5BKY9 247 aaKnown RBP12.21□□□□□ -0.45
FDPS-215ENST00000490140 ZNF658Q5TYW1 1059 aaPredicted RBP12.21□□□□□ -0.45
FDPS-215ENST00000490140 TTC39BQ5VTQ0 682 aaPredicted RBP12.21□□□□□ -0.45
FDPS-215ENST00000490140 RFWD3Q6PCD5 774 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 DSG4Q86SJ6 1040 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 CARNMT1Q8N4J0 409 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 UBA3Q8TBC4 463 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 HNRNPLLQ8WVV9 542 aaKnown RBP12.21□□□□□ -0.45
FDPS-215ENST00000490140 NDRG1Q92597 394 aaKnown RBP12.21□□□□□ -0.45
FDPS-215ENST00000490140 FAM149B1Q96BN6 582 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 EEF2KMTQ96G04 330 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 LRIG1Q96JA1 1093 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 PPP1R9BQ96SB3 815 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 STIM2Q9P246 746 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 TJP2Q9UDY2 1190 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 PCDHB4Q9Y5E5 795 aa12.21□□□□□ -0.45
FDPS-215ENST00000490140 ITIH6Q6UXX5 1313 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 ENC1O14682 589 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 SIN3BO75182 1162 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 RFPL3O75679 317 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 LDOC1O95751 146 aaPredicted RBP12.2□□□□□ -0.46
FDPS-215ENST00000490140 IGHV4-34P06331 123 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 JUPP14923 745 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 C5AR1P21730 350 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 ACADSBP45954 432 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 RGS7P49802 495 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 GALCP54803 685 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 ECT2LQ008S8 904 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 CYP4F3Q08477 520 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 MTA1Q13330 715 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 CNGA2Q16280 664 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 PKDCCQ504Y2 493 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 HS1BP3Q53T59 392 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 NCEH1Q6PIU2 408 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 DHRS13Q6UX07 377 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 LRRC69Q6ZNQ3 347 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 SND1Q7KZF4 910 aaKnown RBP eCLIP12.2□□□□□ -0.462e-7■■□□□ 11.4
FDPS-215ENST00000490140 BEND5Q7L4P6 421 aa12.2□□□□□ -0.46
FDPS-215ENST00000490140 DHX40Q8IX18 779 aaKnown RBP12.2□□□□□ -0.46
FDPS-215ENST00000490140 SMYD4Q8IYR2 804 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms