RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	SERPINB11	Q96P15	392 aa		18.8	■□□□□ 0.6
SRM-206	ENST00000490101	PDE2A	O00408	941 aa	Predicted RBP	18.79	■□□□□ 0.6
SRM-206	ENST00000490101	TLR5	O60602	858 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	TADA3	O75528	432 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	CTH	P32929	405 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	PTPN7	P35236	360 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	CETN2	P41208	172 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	PAFAH1B1	P43034	410 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	CXCL12	P48061	93 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	ARSE	P51690	589 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	MLLT6	P55198	1093 aa	Predicted RBP	18.79	■□□□□ 0.6
SRM-206	ENST00000490101	CKAP4	Q07065	602 aa	Known RBP	18.79	■□□□□ 0.6
SRM-206	ENST00000490101	PON2	Q15165	354 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	TAZ	Q16635	292 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	KCNT1	Q5JUK3	1230 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	HECTD3	Q5T447	861 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	KLHDC10	Q6PID8	442 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101		Q6ZS52	159 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	ZNF572	Q7Z3I7	529 aa	Predicted RBP	18.79	■□□□□ 0.6
SRM-206	ENST00000490101	TMEM150A	Q86TG1	271 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	TADA2B	Q86TJ2	420 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	FAM71B	Q8TC56	605 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	RAPGEF5	Q92565	580 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	MS4A14	Q96JA4	679 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	SNRNP25	Q9BV90	132 aa	Known RBP	18.79	■□□□□ 0.6
SRM-206	ENST00000490101	SLC46A2	Q9BY10	475 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	OBP2A	Q9NY56	170 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	FZD10	Q9ULW2	581 aa		18.79	■□□□□ 0.6
SRM-206	ENST00000490101	SYNJ2BP-COX16	A0A087WUM0	186 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	C3orf70	A6NLC5	250 aa	Predicted RBP	18.78	■□□□□ 0.6
SRM-206	ENST00000490101	PGRMC1	O00264	195 aa	Known RBP	18.78	■□□□□ 0.6
SRM-206	ENST00000490101	KDELR1	P24390	212 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	ADRA1B	P35368	520 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	SCAP	Q12770	1279 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	PUM1	Q14671	1186 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
SRM-206	ENST00000490101	PDK2	Q15119	407 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	RSPO4	Q2I0M5	234 aa	Predicted RBP	18.78	■□□□□ 0.6
SRM-206	ENST00000490101	SMTNL2	Q2TAL5	461 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	BRMS1L	Q5PSV4	323 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	C10orf120	Q5SQS8	335 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	CCDC181	Q5TID7	509 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	AADACL2	Q6P093	401 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	C1orf228	Q6PIY5	440 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	SPOCD1	Q6ZMY3	1216 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	PRR23B	Q6ZRT6	265 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	RALGPS2	Q86X27	583 aa	Predicted RBP	18.78	■□□□□ 0.6
SRM-206	ENST00000490101	VSIG1	Q86XK7	387 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	SPEM1	Q8N4L4	309 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	CCDC185	Q8N715	623 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	CEP112	Q8N8E3	955 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	MNS1	Q8NEH6	495 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	HSPH1	Q92598	858 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	NAP1L3	Q99457	506 aa	Predicted RBP	18.78	■□□□□ 0.6
SRM-206	ENST00000490101	CCSER2	Q9H7U1	834 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	THG1L	Q9NWX6	298 aa	Known RBP	18.78	■□□□□ 0.6
SRM-206	ENST00000490101	MARCH2	Q9P0N8	246 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	COX16	Q9P0S2	106 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	SFMBT1	Q9UHJ3	866 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	GMEB2	Q9UKD1	530 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	NUDT5	Q9UKK9	219 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	RAB23	Q9ULC3	237 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	TLR6	Q9Y2C9	796 aa		18.78	■□□□□ 0.6
SRM-206	ENST00000490101	LRRD1	A4D1F6	860 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	ZNF487	B1APH4	448 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	RIOK3	O14730	519 aa	Known RBP	18.77	■□□□□ 0.6
SRM-206	ENST00000490101	TBX18	O95935	607 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	ATP5C1	P36542	298 aa	Known RBP	18.77	■□□□□ 0.6
SRM-206	ENST00000490101	AVPR1A	P37288	418 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	DMWD	Q09019	674 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	EFEMP1	Q12805	493 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	TRIP4	Q15650	581 aa	Predicted RBP	18.77	■□□□□ 0.6
SRM-206	ENST00000490101	PPP2R5E	Q16537	467 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	DPYSL2	Q16555	572 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	ARL13B	Q3SXY8	428 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	ODF2	Q5BJF6	829 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	ZFYVE27	Q5T4F4	411 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	HEATR6	Q6AI08	1181 aa	Known RBP	18.77	■□□□□ 0.6
SRM-206	ENST00000490101	MFSD7	Q6UXD7	560 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	MAMSTR	Q6ZN01	415 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	SLC13A5	Q86YT5	568 aa	Predicted RBP	18.77	■□□□□ 0.6
SRM-206	ENST00000490101	MAP7D3	Q8IWC1	876 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	CMTM8	Q8IZV2	173 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	CELF5	Q8N6W0	485 aa	Known RBP	18.77	■□□□□ 0.6
SRM-206	ENST00000490101	MAB21L3	Q8N8X9	362 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	KCTD6	Q8NC69	237 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	RNF25	Q96BH1	459 aa	Predicted RBP	18.77	■□□□□ 0.6
SRM-206	ENST00000490101	SLC39A13	Q96H72	371 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	CARD6	Q9BX69	1037 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	WDCP	Q9H6R7	721 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
SRM-206	ENST00000490101	KLHL11	Q9NVR0	708 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
SRM-206	ENST00000490101	DNMT3L	Q9UJW3	386 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	AP4E1	Q9UPM8	1137 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	CCL26	Q9Y258	94 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	EFR3B	Q9Y2G0	817 aa		18.77	■□□□□ 0.6
SRM-206	ENST00000490101	HBS1L	Q9Y450	684 aa	Known RBP	18.77	■□□□□ 0.6
SRM-206	ENST00000490101	KIF26A	Q9ULI4	1882 aa	Predicted RBP	18.77	■□□□□ 0.6
SRM-206	ENST00000490101	MED19	A0JLT2	244 aa	Predicted RBP	18.76	■□□□□ 0.59
SRM-206	ENST00000490101	CHURC1-FNTB	B4DL54	471 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms