RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 NFIL3Q16649 462 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 HNRNPA1L2Q32P51 320 aaKnown RBP14.51□□□□□ -0.09
VARS-227ENST00000489979 KRT39Q6A163 491 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 ZNF605Q86T29 641 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 MMAAQ8IVH4 418 aaKnown RBP14.51□□□□□ -0.09
VARS-227ENST00000489979 ZNF843Q8N446 348 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 LSM14AQ8ND56 463 aaKnown RBP14.51□□□□□ -0.09
VARS-227ENST00000489979 OR2T34Q8NGX1 318 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 SNIP1Q8TAD8 396 aaKnown RBP14.51□□□□□ -0.09
VARS-227ENST00000489979 TSC1Q92574 1164 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 TTC17Q96AE7 1141 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 FAXDC2Q96IV6 333 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 LMLNQ96KR4 655 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 OMDQ99983 421 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 ABCC13Q9NSE7 274 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 STIM2Q9P246 746 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 TSPAN16Q9UKR8 245 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 CFAP46Q8IYW2 2715 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 ZNF462Q96JM2 2506 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 SLC6A4P31645 630 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 GTF2H1P32780 548 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 ARRB1P49407 418 aaPredicted RBP14.5□□□□□ -0.09
VARS-227ENST00000489979 FAM133BQ5BKY9 247 aaKnown RBP14.5□□□□□ -0.09
VARS-227ENST00000489979 MPP7Q5T2T1 576 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 C9orf64Q5T6V5 341 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 GPR155Q7Z3F1 870 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 MFN1Q8IWA4 741 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 SIX6OS1Q8N1H7 587 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 UBA3Q8TBC4 463 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 FGF11Q92914 225 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 MRGPRX3Q96LB0 322 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 RAB20Q9NX57 234 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 ADAMTS1Q9UHI8 967 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 INTS6Q9UL03 887 aaKnown RBP14.5□□□□□ -0.09
VARS-227ENST00000489979 MAPK8IP1Q9UQF2 711 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 MGAQ8IWI9 3026 aa14.5□□□□□ -0.09
VARS-227ENST00000489979 C10orf142B7Z368 130 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 TLR4O00206 839 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 CAPN9O14815 690 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 IRAK2O43187 625 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 BRINP1O60477 761 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 ACSL4O60488 711 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 IGLV3-27P01718 113 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 ASLP04424 464 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 SLC8A1P32418 973 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 SLC11A2P49281 568 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 MXI1P50539 228 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 CCR5P51681 352 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 NXPH1P58417 271 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 CCDC173Q0VFZ6 552 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 BST2Q10589 180 aaKnown RBP14.49□□□□□ -0.09
VARS-227ENST00000489979 ADAM9Q13443 819 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 SGO2Q562F6 1265 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 MSANTD2Q6P1R3 559 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 UNC45BQ8IWX7 931 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 ZNF557Q8N988 423 aaPredicted RBP14.49□□□□□ -0.09
VARS-227ENST00000489979 FBXL13Q8NEE6 735 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 OR14C36Q8NHC7 312 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 FIBINQ8TAL6 211 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 SERAC1Q96JX3 654 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 IRX2Q9BZI1 471 aaPredicted RBP14.49□□□□□ -0.09
VARS-227ENST00000489979 HESX1Q9UBX0 185 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 FZD4Q9ULV1 537 aa14.49□□□□□ -0.09
VARS-227ENST00000489979 NYNRINQ9P2P1 1898 aaKnown RBP14.48□□□□□ -0.09
VARS-227ENST00000489979 DOCK9Q9BZ29 2069 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 TEX51A0A1B0GUA7 166 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 TARSL2A2RTX5 802 aaKnown RBP14.48□□□□□ -0.09
VARS-227ENST00000489979 TTC34A8MYJ7 566 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 K7ELQ4 463 aaPredicted RBP14.48□□□□□ -0.09
VARS-227ENST00000489979 LCP1P13796 627 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 CD19P15391 556 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 GLDCP23378 1020 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 RPL13P26373 211 aaKnown RBP14.48□□□□□ -0.09
VARS-227ENST00000489979 CTSOP43234 321 aaPredicted RBP14.48□□□□□ -0.09
VARS-227ENST00000489979 RXRGP48443 463 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 PSMD8P48556 350 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 ADPRHP54922 357 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 DAOAP59103 153 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 RPS24P62847 133 aaKnown RBP14.48□□□□□ -0.09
VARS-227ENST00000489979 ILKQ13418 452 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 ARID5BQ14865 1188 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 SLC45A4Q5BKX6 768 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 SFMBT2Q5VUG0 894 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 NUGGCQ68CJ6 796 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 NADSYN1Q6IA69 706 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 PCSK4Q6UW60 755 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 MMS22LQ6ZRQ5 1243 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 SND1Q7KZF4 910 aaKnown RBP eCLIP14.48□□□□□ -0.09
VARS-227ENST00000489979 CARNMT1Q8N4J0 409 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 OXR1Q8N573 874 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 AADATQ8N5Z0 425 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 HJURPQ8NCD3 748 aaPredicted RBP14.48□□□□□ -0.09
VARS-227ENST00000489979 MYEOVQ96EZ4 313 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 PRICKLE1Q96MT3 831 aaPredicted RBP14.48□□□□□ -0.09
VARS-227ENST00000489979 FAM129BQ96TA1 746 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 ERVMER34-1Q9H9K5 563 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 CNGB3Q9NQW8 809 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 CLCA2Q9UQC9 943 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 ERVW-1Q9UQF0 538 aa14.48□□□□□ -0.09
VARS-227ENST00000489979 EDDM13A0A1B0GTR0 161 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms