RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ARHGAP44Q17R89 818 aa20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 CARNMT1Q8N4J0 409 aa20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 CPXM1Q96SM3 734 aa20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 PRMT1Q99873 361 aaKnown RBP20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 MIR1-1HGQ9H1L0 117 aa20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 PCED1AQ9H1Q7 454 aa20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 THAP9Q9H5L6 903 aa20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 IL21RQ9HBE5 538 aa20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 KNL1Q8NG31 2342 aa20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 TMEM131Q92545 1883 aa20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 GTPBP10A4D1E9 387 aaKnown RBP20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 BCAT2O15382 392 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 TRUB2O95900 331 aaKnown RBP20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 CTSOP43234 321 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SIM1P81133 766 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ZBTB16Q05516 673 aa20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ARID5BQ14865 1188 aa20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 PITRM1Q5JRX3 1037 aa20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 GBP6Q6ZN66 633 aa20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 GATA6Q92908 595 aa20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 DDX50Q9BQ39 737 aaKnown RBP20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ORAI3Q9BRQ5 295 aa20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ADAM33Q9BZ11 813 aa20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ZDHHC5Q9C0B5 715 aa20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 RSPH9Q9H1X1 276 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 FBRSQ9HAH7 460 aa20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SUN2Q9UH99 717 aa20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 PCDHGC3Q9UN70 934 aa20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF1B-202ENST00000489921 KCNU1A8MYU2 1149 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 CAPN9O14815 690 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 HYAL3O43820 417 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 LUC7L3O95232 432 aaKnown RBP20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 TACR2P21452 398 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 CLCN1P35523 988 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 EXOC3L4Q17RC7 722 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 HNRNPA1L2Q32P51 320 aaKnown RBP20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 C9orf64Q5T6V5 341 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 RAP1GAP2Q684P5 730 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 UNQ6494/PRO21346Q6UXR6 183 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 CREBRFQ8IUR6 639 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 APCDD1Q8J025 514 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 LGI2Q8N0V4 545 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ZNF557Q8N988 423 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 BTN2A3PQ96KV6 586 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 FAM81BQ96LP2 452 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SLC2A13Q96QE2 648 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ERVW-1Q9UQF0 538 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 DSPP15924 2871 aaKnown RBP20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 PLXNA2O75051 1894 aa20.09■□□□□ 0.81
TNFRSF1B-202ENST00000489921 C10orf142B7Z368 130 aa20.08■□□□□ 0.81
TNFRSF1B-202ENST00000489921 CBFA2T3O75081 653 aa20.08■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SIN3BO75182 1162 aa20.08■□□□□ 0.81
TNFRSF1B-202ENST00000489921 USP8P40818 1118 aa20.08■□□□□ 0.81
TNFRSF1B-202ENST00000489921 DEFB106AQ8N104 65 aa20.08■□□□□ 0.81
TNFRSF1B-202ENST00000489921 MLKLQ8NB16 471 aa20.08■□□□□ 0.81
TNFRSF1B-202ENST00000489921 KDM1BQ8NB78 822 aa20.08■□□□□ 0.81
TNFRSF1B-202ENST00000489921 BIRC7Q96CA5 298 aa20.08■□□□□ 0.81
TNFRSF1B-202ENST00000489921 TRIM62Q9BVG3 475 aa20.08■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SERGEFQ9UGK8 458 aa20.08■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SLCO3A1Q9UIG8 710 aa20.08■□□□□ 0.81
TNFRSF1B-202ENST00000489921 A0A1B0GVT2 93 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 TTC34A8MYJ7 566 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 FOXN3O00409 490 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 SEMA4FO95754 770 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 APOEP02649 317 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 DNTTP04053 509 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ASLP04424 464 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 PNMA6AP0CW24 399 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CSNK1EP49674 416 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 CDH18Q13634 790 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 HLA-BQ31612 363 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 MIIPQ5JXC2 388 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ZNF776Q68DI1 518 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 DBX2Q6ZNG2 339 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 PASD1Q8IV76 773 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 NAXDQ8IW45 347 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 KDF1Q8NAX2 398 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 PPP1R13BQ96KQ4 1090 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 FAM129BQ96TA1 746 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 BTBD1Q9H0C5 482 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 GAREM1Q9H706 876 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ASNSD1Q9NWL6 643 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 KIAA1522Q9P206 1035 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 KLK13Q9UKR3 277 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 FNDC3AQ9Y2H6 1198 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 NBEAQ8NFP9 2946 aa20.07■□□□□ 0.8
TNFRSF1B-202ENST00000489921 TP53BP1Q12888 1972 aaPredicted RBP20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 ITIH6Q6UXX5 1313 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 TYW5A2RUC4 315 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 FAM221BA6H8Z2 402 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 IGHV4-34P06331 123 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 GLI1P08151 1106 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 SRPRAP08240 638 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 TRIP6Q15654 476 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 SMYD5Q6GMV2 418 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 OLFML1Q6UWY5 402 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 FAM183BPQ6ZVS7 135 aa20.06■□□□□ 0.8
TNFRSF1B-202ENST00000489921 RAB44Q7Z6P3 723 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms