RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 SLC12A2P55011 1212 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 HNRNPA0Q13151 305 aaKnown RBP5.85□□□□□ -1.47
CCDC39-206ENST00000489868 BIRC2Q13490 618 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 MTX1Q13505 466 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 GLE1Q53GS7 698 aaKnown RBP5.85□□□□□ -1.47
CCDC39-206ENST00000489868 KIAA1755Q5JYT7 1200 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 ZNF569Q5MCW4 686 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 LIPMQ5VYY2 423 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 KLHL17Q6TDP4 642 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 ZNF793Q6ZN11 406 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 MDGA2Q7Z553 956 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 ANKRD13BQ86YJ7 626 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 MSI2Q96DH6 328 aaKnown RBP5.85□□□□□ -1.47
CCDC39-206ENST00000489868 ARPC5LQ9BPX5 153 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 ABHD16BQ9H3Z7 469 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 IL21RQ9HBE5 538 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 PCDHA10Q9Y5I2 948 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 TBC1D3DA0A087WVF3 549 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 TBC1D3IA0A087WXS9 549 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 TBC1D3EA0A087X179 549 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 TBC1D3KA0A087X1G2 549 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 TRBV5-3A0A0A0MS03 114 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 A0A1W2PPC1 479 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 TBC1D3BA6NDS4 549 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 TBC1D3FA6NER0 549 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-206ENST00000489868 TBC1D3LB9A6J9 549 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 TBC1D3HP0C7X1 549 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 NR4A2P43354 598 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 B4GALNT1Q00973 533 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 FOXO1Q12778 655 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 KRT72Q14CN4 511 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 MIDNQ504T8 468 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 ATPAF1Q5TC12 328 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-206ENST00000489868 PXDC1Q5TGL8 231 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 ASPHD1Q5U4P2 390 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 TBC1D3GQ6DHY5 549 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 TBC1D3CQ6IPX1 549 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 RRAGAQ7L523 313 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 RAB11FIP2Q7L804 512 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 TBC1D3Q8IZP1 549 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-206ENST00000489868 ENAHQ8N8S7 591 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-206ENST00000489868 ZNF548Q8NEK5 533 aaPredicted RBP5.84□□□□□ -1.47
CCDC39-206ENST00000489868 KAT2AQ92830 837 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 TMEM79Q9BSE2 394 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 DDX23Q9BUQ8 820 aaKnown RBP5.84□□□□□ -1.47
CCDC39-206ENST00000489868 ELAC1Q9H777 363 aaKnown RBP5.84□□□□□ -1.47
CCDC39-206ENST00000489868 SFXN1Q9H9B4 322 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 ERVK-5Q9HDB9 667 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 TXNRD2Q9NNW7 524 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 LIN7CQ9NUP9 197 aaKnown RBP5.84□□□□□ -1.47
CCDC39-206ENST00000489868 MSRB1Q9NZV6 116 aa5.84□□□□□ -1.47
CCDC39-206ENST00000489868 SRP68Q9UHB9 627 aaKnown RBP5.84□□□□□ -1.47
CCDC39-206ENST00000489868 MBD3L5A6NJ08 208 aaPredicted RBP5.83□□□□□ -1.48
CCDC39-206ENST00000489868 C3orf70A6NLC5 250 aaPredicted RBP5.83□□□□□ -1.48
CCDC39-206ENST00000489868 ZNF814B7Z6K7 855 aa5.83□□□□□ -1.48
CCDC39-206ENST00000489868 FGF2P09038 288 aa5.83□□□□□ -1.48
CCDC39-206ENST00000489868 CDK7P50613 346 aa5.83□□□□□ -1.48
CCDC39-206ENST00000489868 ADGRF4Q8IZF3 695 aa5.83□□□□□ -1.48
CCDC39-206ENST00000489868 PAQR4Q8N4S7 273 aaPredicted RBP5.83□□□□□ -1.48
CCDC39-206ENST00000489868 IP6K1Q92551 441 aa5.83□□□□□ -1.48
CCDC39-206ENST00000489868 KAT2BQ92831 832 aa5.83□□□□□ -1.48
CCDC39-206ENST00000489868 EME1Q96AY2 570 aa5.83□□□□□ -1.48
CCDC39-206ENST00000489868 HTATIP2Q9BUP3 242 aa5.83□□□□□ -1.48
CCDC39-206ENST00000489868 BRD8Q9H0E9 1235 aa5.83□□□□□ -1.48
CCDC39-206ENST00000489868 PAPOLBQ9NRJ5 636 aaKnown RBP5.83□□□□□ -1.48
CCDC39-206ENST00000489868 KCND3Q9UK17 655 aa5.83□□□□□ -1.48
CCDC39-206ENST00000489868 C19orf53Q9UNZ5 99 aaPredicted RBP5.83□□□□□ -1.48
CCDC39-206ENST00000489868 COMMD10Q9Y6G5 202 aa5.83□□□□□ -1.48
CCDC39-206ENST00000489868 LMTK3Q96Q04 1460 aa5.83□□□□□ -1.48
CCDC39-206ENST00000489868 FAM90A20PA6NIJ5 464 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 TLX3O43711 291 aaPredicted RBP5.82□□□□□ -1.48
CCDC39-206ENST00000489868 TNFRSF1BP20333 461 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 PTGER1P34995 402 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 RCAN1P53805 252 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 PRKAA2P54646 552 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 TIGD6Q17RP2 521 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 LRCH2Q5VUJ6 765 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 TTLL5Q6EMB2 1281 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 ERAP2Q6P179 960 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 IRF2BP2Q7Z5L9 587 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 CCDC117Q8IWD4 279 aaPredicted RBP5.82□□□□□ -1.48
CCDC39-206ENST00000489868 MYCT1Q8N699 235 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 SLC2A12Q8TD20 617 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 ZFYVE19Q96K21 471 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 FCRL4Q96PJ5 515 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 AAMDCQ9H7C9 122 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 ZBTB40Q9NUA8 1239 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 UTS2RQ9UKP6 389 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 FBXO4Q9UKT5 387 aa5.82□□□□□ -1.48
CCDC39-206ENST00000489868 AGO2Q9UKV8 859 aaKnown RBP5.82□□□□□ -1.48
CCDC39-206ENST00000489868 CXorf65A6NEN9 183 aa5.81□□□□□ -1.48
CCDC39-206ENST00000489868 H0Y3Z8 333 aa5.81□□□□□ -1.48
CCDC39-206ENST00000489868 SOCS2O14508 198 aa5.81□□□□□ -1.48
CCDC39-206ENST00000489868 SERPINA4P29622 427 aa5.81□□□□□ -1.48
CCDC39-206ENST00000489868 ZBTB16Q05516 673 aa5.81□□□□□ -1.48
CCDC39-206ENST00000489868 OS9Q13438 667 aaPredicted RBP5.81□□□□□ -1.48
CCDC39-206ENST00000489868 LRRC24Q50LG9 513 aa5.81□□□□□ -1.48
CCDC39-206ENST00000489868 TMEM88Q6PEY1 159 aa5.81□□□□□ -1.48
CCDC39-206ENST00000489868 RASGRP2Q7LDG7 609 aa5.81□□□□□ -1.48
CCDC39-206ENST00000489868 ADPRHL1Q8NDY3 354 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms