RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 OSBPL9Q96SU4 736 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 PRPF18Q99633 342 aaKnown RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 MRPL9Q9BYD2 267 aaKnown RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 DPH1Q9BZG8 443 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 TINAGL1Q9GZM7 467 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 ANKRD2Q9GZV1 360 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 TWSG1Q9GZX9 223 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 ABCG4Q9H172 646 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 TTYH1Q9H313 450 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 ABHD16BQ9H3Z7 469 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 GRPEL1Q9HAV7 217 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 SAYSD1Q9NPB0 183 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 NECTIN3Q9NQS3 549 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 WWOXQ9NZC7 414 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 CFDP1Q9UEE9 299 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 CYP46A1Q9Y6A2 500 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 EEA1Q15075 1411 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 IQGAP2Q13576 1575 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 H0Y3Z8 333 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 M0QYG6 137 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 UBE2CO00762 179 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 AP3D1O14617 1153 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 HNRNPDLO14979 420 aaKnown RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 KRT38O76015 456 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 BEST1O76090 585 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 ACTL6BO94805 426 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 CHEK2O96017 543 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 TK1P04183 234 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 EBLN1P0CF75 366 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 IDEP14735 1019 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 ZFXP17010 805 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 ITGALP20701 1170 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 TDO2P48775 406 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 CARSP49589 748 aaKnown RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 PLIN5Q00G26 463 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 CREB5Q02930 508 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 TFF2Q03403 129 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 EIF2B5Q13144 721 aaKnown RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 BTBD16Q32M84 506 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 ADCK5Q3MIX3 580 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 TMEM119Q4V9L6 283 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 CRTC1Q6UUV9 634 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 ZDHHC24Q6UX98 284 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 ZNF783Q6ZMS7 281 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 ZNF517Q6ZMY9 492 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 TMTC3Q6ZXV5 915 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 BEND5Q7L4P6 421 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 PTF1AQ7RTS3 328 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 SZRD1Q7Z422 152 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 PPP1R32Q7Z5V6 425 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 PXKQ7Z7A4 578 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 LMNTD2Q8IXW0 634 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 GOT1L1Q8NHS2 421 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 AFAP1L1Q8TED9 768 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 FAM136AQ96C01 138 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 PERPQ96FX8 193 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 ALG8Q9BVK2 526 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 SEPSECSQ9HD40 501 aaKnown RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 SERHLQ9NQF3 203 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 CCDC177Q9NQR7 707 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 TM7SF3Q9NS93 570 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 PIH1D1Q9NWS0 290 aaKnown RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 EHD3Q9NZN3 535 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 C5AR2Q9P296 337 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 KCND3Q9UK17 655 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 C19orf53Q9UNZ5 99 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 DNAJC16Q9Y2G8 782 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 RAD54BQ9Y620 910 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 PTPRGP23470 1445 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 KIF21BO75037 1637 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 ADCY10Q96PN6 1610 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 TNIKQ9UKE5 1360 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 STX16-NPEPL1H3BU86 382 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 GCOM1H8Y6P7 765 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 PYCARD-AS1I3L0S3 204 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 STX16O14662 325 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 PPM1DO15297 605 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 PRKCGP05129 697 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 HNRNPCP07910 306 aaKnown RBP eCLIP3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 CELA2AP08217 269 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 ITGA2BP08514 1039 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 FTH1P19P0C7X4 201 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 DRD4P21917 467 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 CD6P30203 668 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 CD86P42081 329 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 GCLCP48506 637 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 CCT8P50990 548 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 PAPOLAP51003 745 aaKnown RBP3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 CLNS1AP54105 237 aaKnown RBP3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 MC1RQ01726 317 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 DDR1Q08345 913 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 TCF15Q12870 199 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 ACVR2BQ13705 512 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 C1orf141Q5JVX7 400 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 THEMIS2Q5TEJ8 643 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 DCAF12L1Q5VU92 463 aa3.47□□□□□ -1.85
DEPDC1-204ENST00000489862 ATG16L1Q676U5 607 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms