RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CCDC124Q96CT7 223 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 APOPT1Q96IL0 206 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 SPACA7Q96KW9 195 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ACAP3Q96P50 834 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 FAM111AQ96PZ2 611 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 NACC1Q96RE7 527 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 RMDN3Q96TC7 470 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TMEM79Q9BSE2 394 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 C17orf80Q9BSJ5 609 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 RTKNQ9BST9 563 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 HERC2P3Q9BVR0 1158 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 PLA2G12BQ9BX93 195 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 NPLQ9BXD5 320 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 NIFKQ9BYG3 293 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ANO3Q9BYT9 981 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 B3GNT4Q9C0J1 378 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 C12orf65Q9H3J6 166 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 SMARCAD1Q9H4L7 1026 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 FAM96AQ9H5X1 160 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 COPS7BQ9H9Q2 264 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 MAGEE1Q9HCI5 957 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 AASDHPPTQ9NRN7 309 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 SEPT11Q9NVA2 429 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 THG1LQ9NWX6 298 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 BARHL2Q9NY43 387 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 DDX56Q9NY93 547 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 KCNN3Q9UGI6 736 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 PRPF19Q9UMS4 504 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 ARHGAP26Q9UNA1 814 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 CDC14AQ9UNH5 594 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 TRAF6Q9Y4K3 522 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 PCDHGA3Q9Y5H0 932 aa4.89□□□□□ -1.63
SNRNP40-206ENST00000489853 PRSS51A0A1B0GVH4 220 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 FAM181BA6NEQ2 426 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 ZSCAN5BA6NJL1 495 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 B8ZZF3 427 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 CLDN25C9JDP6 229 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 E9PMD0 336 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 AP3B1O00203 1094 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 RNF103O00237 685 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 EREGO14944 169 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 MSI1O43347 362 aaKnown RBP4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 NOL3O60936 208 aaKnown RBP4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 FBXO24O75426 580 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 JRKO75564 520 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 TSPAN9O75954 239 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 SORBS2O94875 1100 aaKnown RBP4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 ERBB2P04626 1255 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 PRKCAP17252 672 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 CTRB1P17538 263 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 POLR2CP19387 275 aaPredicted RBP4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 CCNA2P20248 432 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 CD247P20963 164 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 BMPR1AP36894 532 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 GPX6P59796 221 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 TMPRSS15P98073 1019 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 PPP2R2BQ00005 443 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 OCA2Q04671 838 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 PRKCQQ04759 706 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 NIPAL4Q0D2K0 466 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 GALNT1Q10472 559 aaPredicted RBP4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 BST1Q10588 318 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 CDC20Q12834 499 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 TRAF2Q12933 501 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 NFATC3Q12968 1075 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 PTP4A2Q12974 167 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 NFE2Q16621 373 aaPredicted RBP4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 TBC1D10BQ4KMP7 808 aaPredicted RBP4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 C4orf17Q53FE4 359 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 FAM47CQ5HY64 1035 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 CEP78Q5JTW2 689 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 SLC10A5Q5PT55 438 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 TCHHL1Q5QJ38 904 aaPredicted RBP4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 GPR107Q5VW38 600 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 CTRB2Q6GPI1 263 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 FAM117BQ6P1L5 589 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 GALNT18Q6P9A2 607 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 IDO2Q6ZQW0 420 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 TOM1L2Q6ZVM7 507 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 ERMP1Q7Z2K6 904 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 ZNF438Q7Z4V0 828 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 AKAP14Q86UN6 197 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 LILRA2Q8N149 483 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 FIBCD1Q8N539 461 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 TMEM102Q8N9M5 508 aaPredicted RBP4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 GABPB2Q8TAK5 448 aaPredicted RBP4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 CHAC2Q8WUX2 184 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 DCAKDQ8WVC6 231 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 TFB1MQ8WVM0 346 aaKnown RBP4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 S100ZQ8WXG8 99 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 JDP2Q8WYK2 163 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 ATG4AQ8WYN0 398 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 TRIB2Q92519 343 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 APBB2Q92870 758 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 LRRC59Q96AG4 307 aaKnown RBP4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 ARMC5Q96C12 935 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 GPRASP2Q96D09 838 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 PGBD4Q96DM1 585 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 TXNDC15Q96J42 360 aa4.88□□□□□ -1.63
SNRNP40-206ENST00000489853 SUSD3Q96L08 255 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms