RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 LGI2Q8N0V4 545 aa11.25□□□□□ -0.61
TFF3-203ENST00000489676 UBL4BQ8N7F7 174 aa11.25□□□□□ -0.61
TFF3-203ENST00000489676 TBC1D31Q96DN5 1066 aa11.25□□□□□ -0.61
TFF3-203ENST00000489676 CHFRQ96EP1 664 aa11.25□□□□□ -0.61
TFF3-203ENST00000489676 C16orf45Q96MC5 204 aaPredicted RBP11.25□□□□□ -0.61
TFF3-203ENST00000489676 CSPG4P5Q96PW8 444 aa11.25□□□□□ -0.61
TFF3-203ENST00000489676 ASB2Q96Q27 587 aa11.25□□□□□ -0.61
TFF3-203ENST00000489676 EPAS1Q99814 870 aa11.25□□□□□ -0.61
TFF3-203ENST00000489676 DDX50Q9BQ39 737 aaKnown RBP11.25□□□□□ -0.61
TFF3-203ENST00000489676 TRMT61BQ9BVS5 477 aaKnown RBP11.25□□□□□ -0.61
TFF3-203ENST00000489676 CARD9Q9H257 536 aa11.25□□□□□ -0.61
TFF3-203ENST00000489676 SPHK2Q9NRA0 654 aa11.25□□□□□ -0.61
TFF3-203ENST00000489676 THG1LQ9NWX6 298 aaKnown RBP11.25□□□□□ -0.61
TFF3-203ENST00000489676 PPARGC1AQ9UBK2 798 aaKnown RBP11.25□□□□□ -0.61
TFF3-203ENST00000489676 LIMD1Q9UGP4 676 aa11.25□□□□□ -0.61
TFF3-203ENST00000489676 hCG_1818297A0A087WSY0 165 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 WASH4PA8MWX3 477 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 PI4K2BG5E9Z4 385 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 EEF2KO00418 725 aaKnown RBP11.24□□□□□ -0.61
TFF3-203ENST00000489676 DCLK1O15075 740 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 CNTN5O94779 1100 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 PYGMP11217 842 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 MSNP26038 577 aaKnown RBP11.24□□□□□ -0.61
TFF3-203ENST00000489676 GDI1P31150 447 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 TPI1P60174 286 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 AMPD2Q01433 879 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 TNK2Q07912 1038 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 DHCR24Q15392 516 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 RPS6KA1Q15418 735 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 PPP2R5EQ16537 467 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 MPPE1Q53F39 396 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 ALFQ53S48 1182 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 LY6G5CQ5SRR4 150 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 TTC39BQ5VTQ0 682 aaPredicted RBP11.24□□□□□ -0.61
TFF3-203ENST00000489676 PAPD7Q5XG87 772 aaKnown RBP11.24□□□□□ -0.61
TFF3-203ENST00000489676 AADACL2Q6P093 401 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 MFSD7Q6UXD7 560 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 SPOCD1Q6ZMY3 1216 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 CHST9Q7L1S5 443 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 CIR1Q86X95 450 aaPredicted RBP11.24□□□□□ -0.61
TFF3-203ENST00000489676 ETFBKMTQ8IXQ9 262 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 SLC44A3Q8N4M1 653 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 KCTD6Q8NC69 237 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 HJURPQ8NCD3 748 aaPredicted RBP11.24□□□□□ -0.61
TFF3-203ENST00000489676 PCDH19Q8TAB3 1148 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 IRF7Q92985 503 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 ATP2A3Q93084 1043 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 RBM41Q96IZ5 413 aaKnown RBP11.24□□□□□ -0.61
TFF3-203ENST00000489676 RPRD1AQ96P16 312 aaPredicted RBP11.24□□□□□ -0.61
TFF3-203ENST00000489676 HERPUD2Q9BSE4 406 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 ZYG11BQ9C0D3 744 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 KLC2Q9H0B6 622 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 EBF3Q9H4W6 596 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 TRPV5Q9NQA5 729 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 ARHGEF4Q9NR80 690 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 TMEM248Q9NWD8 314 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 MPP6Q9NZW5 540 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.24□□□□□ -0.61
TFF3-203ENST00000489676 MYO10Q9HD67 2058 aa11.24□□□□□ -0.61
TFF3-203ENST00000489676 A0A1B0GVM2 712 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 TCAF2A6NFQ2 919 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 H3BRJ5 948 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 FGF10O15520 208 aaPredicted RBP11.23□□□□□ -0.61
TFF3-203ENST00000489676 CREB3O43889 395 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 CACNG3O60359 315 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 TSPAN3O60637 253 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 ZRANB2O95218 330 aaKnown RBP eCLIP11.23□□□□□ -0.61
TFF3-203ENST00000489676 NFATC1O95644 943 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 ADH5P11766 374 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 RHOQP17081 205 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 EPHB2P29323 1055 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 ARL4AP40617 200 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 DNA2P51530 1060 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 COPS2P61201 443 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 KRT81Q14533 505 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 TFDP3Q5H9I0 405 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 RABGAP1LQ5R372 815 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 SLC9A4Q6AI14 798 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 CXorf57Q6NSI4 855 aaKnown RBP11.23□□□□□ -0.61
TFF3-203ENST00000489676 LRRC31Q6UY01 552 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 TPGS1Q6ZTW0 290 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 YAF2Q8IY57 180 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 RCOR2Q8IZ40 523 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 CFAP52Q8N1V2 620 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 PQLC3Q8N755 202 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 RTL3Q8N8U3 475 aaKnown RBP11.23□□□□□ -0.61
TFF3-203ENST00000489676 WFDC5Q8TCV5 224 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 DNASE1L2Q92874 299 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 RNF25Q96BH1 459 aaPredicted RBP11.23□□□□□ -0.61
TFF3-203ENST00000489676 RNF157Q96PX1 679 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 NAPGQ99747 312 aaPredicted RBP11.23□□□□□ -0.61
TFF3-203ENST00000489676 CALN1Q9BXU9 219 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 ECT2Q9H8V3 914 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 ETNK2Q9NVF9 386 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 GTSE1Q9NYZ3 720 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 FBXO10Q9UK96 956 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 SNX12Q9UMY4 172 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 MFHAS1Q9Y4C4 1052 aa11.23□□□□□ -0.61
TFF3-203ENST00000489676 ESPNB1AK53 854 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms