RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 FAM71DQ8N9W8 422 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 LEMD2Q8NC56 503 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 AENQ8WTP8 325 aaKnown RBP22.29■■□□□ 1.16
SMC4-221ENST00000489573 TFB1MQ8WVM0 346 aaKnown RBP22.29■■□□□ 1.16
SMC4-221ENST00000489573 AZIN2Q96A70 460 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 TIFAQ96CG3 184 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 SNF8Q96H20 258 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 ZFRQ96KR1 1074 aaKnown RBP22.29■■□□□ 1.16
SMC4-221ENST00000489573 GKN1Q9NS71 199 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 SMPD4Q9NXE4 827 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 WHRNQ9P202 907 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 COLQQ9Y215 455 aaPredicted RBP22.29■■□□□ 1.16
SMC4-221ENST00000489573 IGLV3-10A0A075B6K4 115 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 PPP1R12AO14974 1030 aaPredicted RBP22.29■■□□□ 1.16
SMC4-221ENST00000489573 ZSCAN5DPP0CG00 497 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 IRF1P10914 325 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 TACR2P21452 398 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 RBL1P28749 1068 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 CORO1AP31146 461 aaKnown RBP22.29■■□□□ 1.16
SMC4-221ENST00000489573 ADCY8P40145 1251 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 BEND6Q5SZJ8 279 aaPredicted RBP22.29■■□□□ 1.16
SMC4-221ENST00000489573 CCDC33Q8N5R6 958 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 RTL3Q8N8U3 475 aaKnown RBP22.29■■□□□ 1.16
SMC4-221ENST00000489573 CYP2S1Q96SQ9 504 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 FAM129AQ9BZQ8 928 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 ZYG11BQ9C0D3 744 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 USP29Q9HBJ7 922 aa22.29■■□□□ 1.16
SMC4-221ENST00000489573 DNMT3BQ9UBC3 853 aaKnown RBP22.29■■□□□ 1.16
SMC4-221ENST00000489573 TRAV19A0A0A6YYK7 116 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 WASH4PA8MWX3 477 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 NCAM2O15394 837 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 KCNN4O15554 427 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 RHOP08100 348 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 GJA1P17302 382 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 MX2P20592 715 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 IVDP26440 423 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 NRIP1P48552 1158 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 SMAD3P84022 425 aaKnown RBP22.28■■□□□ 1.16
SMC4-221ENST00000489573 CALCOCO2Q13137 446 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 FBXL22Q6P050 247 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 EMBQ6PCB8 327 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 DENND1CQ8IV53 801 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 LZTR1Q8N653 840 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 MAB21L3Q8N8X9 362 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 BBOF1Q8ND07 529 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 RTP4Q96DX8 246 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 PRKD2Q9BZL6 878 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 NEUROG2Q9H2A3 272 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 MPP6Q9NZW5 540 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 CPQQ9Y646 472 aa22.28■■□□□ 1.16
SMC4-221ENST00000489573 ATG2AQ2TAZ0 1938 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 GOLGA6L7A0A1B0GV03 622 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 F5H5T6 163 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 SEC31AO94979 1220 aaKnown RBP22.27■■□□□ 1.16
SMC4-221ENST00000489573 KLKB1P03952 638 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 RHOQP17081 205 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 ITIH2P19823 946 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 CCR2P41597 374 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 SLC7A9P82251 487 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 GALNT2Q10471 571 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 PRKD1Q15139 912 aaPredicted RBP22.27■■□□□ 1.16
SMC4-221ENST00000489573 ZNF697Q5TEC3 545 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 ZDHHC24Q6UX98 284 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 NLRP14Q86W24 1093 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 NETO2Q8NC67 525 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 SHKBP1Q8TBC3 707 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 LRRC45Q96CN5 670 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 RPRD1AQ96P16 312 aaPredicted RBP22.27■■□□□ 1.16
SMC4-221ENST00000489573 CDCA3Q99618 268 aaPredicted RBP22.27■■□□□ 1.16
SMC4-221ENST00000489573 KLC2Q9H0B6 622 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 PRDM12Q9H4Q4 367 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 ZDHHC18Q9NUE0 388 aa22.27■■□□□ 1.16
SMC4-221ENST00000489573 DRGXA6NNA5 263 aa22.26■■□□□ 1.15
SMC4-221ENST00000489573 NRG2O14511 850 aaPredicted RBP22.26■■□□□ 1.15
SMC4-221ENST00000489573 ZNF189O75820 626 aaPredicted RBP22.26■■□□□ 1.15
SMC4-221ENST00000489573 LATS1O95835 1130 aa22.26■■□□□ 1.15
SMC4-221ENST00000489573 CKMP06732 381 aa22.26■■□□□ 1.15
SMC4-221ENST00000489573 DDX6P26196 483 aaKnown RBP eCLIP22.26■■□□□ 1.15
SMC4-221ENST00000489573 PLTPP55058 493 aa22.26■■□□□ 1.15
SMC4-221ENST00000489573 GPS1Q13098 491 aa22.26■■□□□ 1.15
SMC4-221ENST00000489573 P3H1Q32P28 736 aa22.26■■□□□ 1.15
SMC4-221ENST00000489573 ARHGAP15Q53QZ3 475 aa22.26■■□□□ 1.15
SMC4-221ENST00000489573 FAM133BQ5BKY9 247 aaKnown RBP22.26■■□□□ 1.15
SMC4-221ENST00000489573 HEATR6Q6AI08 1181 aaKnown RBP22.26■■□□□ 1.15
SMC4-221ENST00000489573 TP53INP2Q8IXH6 220 aa22.26■■□□□ 1.15
SMC4-221ENST00000489573 LRRN4Q8WUT4 740 aa22.26■■□□□ 1.15
SMC4-221ENST00000489573 IGSF8Q969P0 613 aa22.26■■□□□ 1.15
SMC4-221ENST00000489573 ZNF707Q96C28 371 aaPredicted RBP22.26■■□□□ 1.15
SMC4-221ENST00000489573 MRPL38Q96DV4 380 aaKnown RBP22.26■■□□□ 1.15
SMC4-221ENST00000489573 LGMNQ99538 433 aa22.26■■□□□ 1.15
SMC4-221ENST00000489573 BRD8Q9H0E9 1235 aa22.26■■□□□ 1.15
SMC4-221ENST00000489573 DONSONQ9NYP3 566 aa22.26■■□□□ 1.15
SMC4-221ENST00000489573 CCDC195A0A1B0GUA6 201 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 VAV1P15498 845 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 SLC6A4P31645 630 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 RPL22P35268 128 aaKnown RBP22.25■■□□□ 1.15
SMC4-221ENST00000489573 ACTN2P35609 894 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 IRAK1P51617 712 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 STXBP5Q5T5C0 1151 aa22.25■■□□□ 1.15
SMC4-221ENST00000489573 IZUMO3Q5VZ72 239 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms