RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ZNF689Q96CS4 500 aaPredicted RBP8.73□□□□□ -1.01
VTI1A-207ENST00000489357 MTBPQ96DY7 904 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 PIWIL1Q96J94 861 aaKnown RBP8.73□□□□□ -1.01
VTI1A-207ENST00000489357 FAM161BQ96MY7 647 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 OLFM3Q96PB7 478 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 CSPG4P5Q96PW8 444 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 PRMT1Q99873 361 aaKnown RBP8.73□□□□□ -1.01
VTI1A-207ENST00000489357 APOL6Q9BWW8 343 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 DPEP3Q9H4B8 488 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 TRABDQ9H4I3 376 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 CSNK1G1Q9HCP0 422 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 FZD10Q9ULW2 581 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 USP3Q9Y6I4 520 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 IKBKGQ9Y6K9 419 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 TSC2P49815 1807 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 CHD7Q9P2D1 2997 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 A0A0U1RQF3 1178 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 ERI2A8K979 691 aaKnown RBP8.72□□□□□ -1.01
VTI1A-207ENST00000489357 KCNN4O15554 427 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 SNX3O60493 162 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 DGKIO75912 1065 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 TMEM63AO94886 807 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 OAS1P00973 400 aaKnown RBP8.72□□□□□ -1.01
VTI1A-207ENST00000489357 VIMP08670 466 aaKnown RBP8.72□□□□□ -1.01
VTI1A-207ENST00000489357 LINC00271P0C7V0 271 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 CCDC130P13994 396 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 ETS1P14921 441 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 KRT15P19012 456 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 LMO2P25791 158 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 GCAP28676 217 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 ADORA2BP29275 332 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 MSH2P43246 934 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 GLUD2P49448 558 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 GPX6P59796 221 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 ADCY1Q08828 1119 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 CCDC15Q0P6D6 951 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 GRIK3Q13003 919 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 DNAJC3Q13217 504 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 SEMA5AQ13591 1074 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 PAFAH1B3Q15102 231 aaKnown RBP8.72□□□□□ -1.01
VTI1A-207ENST00000489357 TMED2Q15363 201 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 TAF5Q15542 800 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 DBN1Q16643 649 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 SKIDA1Q1XH10 827 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 ARL13BQ3SXY8 428 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 SH3PXD2AQ5TCZ1 1133 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 HEATR6Q6AI08 1181 aaKnown RBP8.72□□□□□ -1.01
VTI1A-207ENST00000489357 CLEC20AQ6ZU45 233 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 Q6ZVU0 165 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 ZC3H18Q86VM9 953 aaKnown RBP8.72□□□□□ -1.01
VTI1A-207ENST00000489357 METTL23Q86XA0 190 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 DEPDC4Q8N2C3 294 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 FBXO36Q8NEA4 188 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 GSTCDQ8NEC7 633 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 UHMK1Q8TAS1 419 aaKnown RBP8.72□□□□□ -1.01
VTI1A-207ENST00000489357 ZNF398Q8TD17 642 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 DENND1AQ8TEH3 1009 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 TFB1MQ8WVM0 346 aaKnown RBP8.72□□□□□ -1.01
VTI1A-207ENST00000489357 CCT6BQ92526 530 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 SMARCD1Q96GM5 515 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 SENP8Q96LD8 212 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 PPP1R2P1Q96PQ5 205 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 VAT1Q99536 393 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 ACBD6Q9BR61 282 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 PBX4Q9BYU1 374 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 DHX35Q9H5Z1 703 aaKnown RBP8.72□□□□□ -1.01
VTI1A-207ENST00000489357 ELAC1Q9H777 363 aaKnown RBP8.72□□□□□ -1.01
VTI1A-207ENST00000489357 KCNK9Q9NPC2 374 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 RAB6BQ9NRW1 208 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 ETNK2Q9NVF9 386 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 MKS1Q9NXB0 559 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 MTMR10Q9NXD2 777 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 SAE1Q9UBE0 346 aaPredicted RBP8.72□□□□□ -1.01
VTI1A-207ENST00000489357 STARD13Q9Y3M8 1113 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 USP15Q9Y4E8 981 aaPredicted RBP8.72□□□□□ -1.01
VTI1A-207ENST00000489357 PCDHA11Q9Y5I1 949 aa8.72□□□□□ -1.01
VTI1A-207ENST00000489357 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.72□□□□□ -1.01
VTI1A-207ENST00000489357 TRANK1O15050 2925 aa8.71□□□□□ -1.01
VTI1A-207ENST00000489357 KIAA1671Q9BY89 1806 aa8.71□□□□□ -1.01
VTI1A-207ENST00000489357 A0A0A0MRY4 1105 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 ARL5CA6NH57 179 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 CCT8L1PA6NM43 557 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 M0QZQ0 153 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 TYROBPO43914 113 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 GRAP2O75791 330 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 KRT37O76014 449 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 ASMTLO95671 621 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 IL1BP01584 269 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 PDGFRBP09619 1106 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 LCP1P13796 627 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 TYMPP19971 482 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 MX2P20592 715 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 PRKCHP24723 683 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 SKIV2L2P42285 1042 aaKnown RBP8.71□□□□□ -1.02
VTI1A-207ENST00000489357 SULT1E1P49888 294 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 SERPINB9P50453 376 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 DAOAP59103 153 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 ACTN3Q08043 901 aaPredicted RBP8.71□□□□□ -1.02
VTI1A-207ENST00000489357 ADIGQ0VDE8 80 aa8.71□□□□□ -1.02
VTI1A-207ENST00000489357 IFT88Q13099 833 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms