RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 HARS2P49590 506 aaKnown RBP11.83□□□□□ -0.52
C9orf3-220ENST00000489318 CYP4F8P98187 520 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 PPIDQ08752 370 aaKnown RBP11.83□□□□□ -0.52
C9orf3-220ENST00000489318 AUHQ13825 339 aaKnown RBP11.83□□□□□ -0.52
C9orf3-220ENST00000489318 PDK1Q15118 436 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 TRADDQ15628 312 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 P3H1Q32P28 736 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 MAP9Q49MG5 647 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 TXNDC8Q6A555 127 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 FBXL22Q6P050 247 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 EMBQ6PCB8 327 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 Q6ZNB5 142 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 C14orf80Q86SX3 495 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 GLIS1Q8NBF1 620 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 SHKBP1Q8TBC3 707 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 ADAMTS19Q8TE59 1207 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 TIFAQ96CG3 184 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 SLC22A12Q96S37 553 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 CORO1BQ9BR76 489 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 ZYG11BQ9C0D3 744 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 SIK2Q9H0K1 926 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 CERS4Q9HA82 394 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 ZDHHC18Q9NUE0 388 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 DZANK1Q9NVP4 752 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 TMEM248Q9NWD8 314 aa11.83□□□□□ -0.52
C9orf3-220ENST00000489318 DNMT3BQ9UBC3 853 aaKnown RBP11.83□□□□□ -0.52
C9orf3-220ENST00000489318 DOCK6Q96HP0 2047 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 TRAV19A0A0A6YYK7 116 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 A0A1W2PRU2 124 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 NDC80O14777 642 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 PER2O15055 1255 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 SEC31AO94979 1220 aaKnown RBP11.82□□□□□ -0.52
C9orf3-220ENST00000489318 KLKB1P03952 638 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 RHOP08100 348 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 MBL2P11226 248 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-220ENST00000489318 MYL4P12829 197 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 VAV1P15498 845 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 TCF3P15923 654 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 MX2P20592 715 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 TACR2P21452 398 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 SLC11A2P49281 568 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 BEND6Q5SZJ8 279 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-220ENST00000489318 RAP1GAP2Q684P5 730 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 RHBDF2Q6PJF5 856 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 ZDHHC24Q6UX98 284 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 LRRC31Q6UY01 552 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 TMEM184AQ6ZMB5 413 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 ZC3H18Q86VM9 953 aaKnown RBP11.82□□□□□ -0.52
C9orf3-220ENST00000489318 CHSY1Q86X52 802 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 ARHGAP12Q8IWW6 846 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 UMODL1-AS1Q8N2C9 162 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 ARL14EPQ8N8R7 260 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-220ENST00000489318 BBOF1Q8ND07 529 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 VN1R2Q8NFZ6 395 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 ART4Q93070 314 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 CAVIN3Q969G5 261 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 SNF8Q96H20 258 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 PRICKLE1Q96MT3 831 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-220ENST00000489318 NEUROG2Q9H2A3 272 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 DPH5Q9H2P9 285 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 ATXN3LQ9H3M9 355 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 TLE6Q9H808 572 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 SFXN1Q9H9B4 322 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 HCFC1R1Q9NWW0 138 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 DONSONQ9NYP3 566 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 ASIC3Q9UHC3 531 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 VANGL2Q9ULK5 521 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 NFU1Q9UMS0 254 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 ARHGAP26Q9UNA1 814 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 CPQQ9Y646 472 aa11.82□□□□□ -0.52
C9orf3-220ENST00000489318 SHROOM3Q8TF72 1996 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 TNRC18O15417 2968 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-220ENST00000489318 A0A1W2PPC1 479 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 F5H5T6 163 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 H7C0C1 242 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 SGK1O00141 431 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 DNALI1O14645 258 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-220ENST00000489318 MAP3K6O95382 1288 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 HMBSP08397 361 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 SRGAP2BP0DMP2 458 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 HDCP19113 662 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 ITIH2P19823 946 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 RBL1P28749 1068 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 CORO1AP31146 461 aaKnown RBP11.81□□□□□ -0.52
C9orf3-220ENST00000489318 SLC6A4P31645 630 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 GARSP41250 739 aaKnown RBP11.81□□□□□ -0.52
C9orf3-220ENST00000489318 ATP5OP48047 213 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 NRIP1P48552 1158 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 MAPKAPK2P49137 400 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 IRAK1P51617 712 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 ZXDBP98169 803 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 CAV1Q03135 178 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 SLC5A9Q2M3M2 681 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 TTC39BQ5VTQ0 682 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-220ENST00000489318 HEATR6Q6AI08 1181 aaKnown RBP11.81□□□□□ -0.52
C9orf3-220ENST00000489318 RWDD4Q6NW29 188 aaKnown RBP11.81□□□□□ -0.52
C9orf3-220ENST00000489318 DARS2Q6PI48 645 aaKnown RBP11.81□□□□□ -0.52
C9orf3-220ENST00000489318 GSTA5Q7RTV2 222 aa11.81□□□□□ -0.52
C9orf3-220ENST00000489318 DDX42Q86XP3 938 aaKnown RBP eCLIP11.81□□□□□ -0.52
C9orf3-220ENST00000489318 GSPT2Q8IYD1 628 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms