RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 EIF4EBP2Q13542 120 aaPredicted RBP14.5□□□□□ -0.09
VTI1A-206ENST00000489142 CAMK2GQ13555 558 aaPredicted RBP14.5□□□□□ -0.09
VTI1A-206ENST00000489142 STX1AQ16623 288 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 UAP1L1Q3KQV9 507 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 PITRM1Q5JRX3 1037 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 OTUD1Q5VV17 481 aaPredicted RBP14.5□□□□□ -0.09
VTI1A-206ENST00000489142 RGL4Q8IZJ4 473 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 ATP6V0D2Q8N8Y2 350 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 TMEM35BQ8NCS4 154 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 OR2I1PQ8NGU4 316 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 CPA5Q8WXQ8 436 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 DDX1Q92499 740 aaKnown RBP14.5□□□□□ -0.09
VTI1A-206ENST00000489142 PRMT1Q99873 361 aaKnown RBP14.5□□□□□ -0.09
VTI1A-206ENST00000489142 NLRC4Q9NPP4 1024 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 TMEM9BQ9NQ34 198 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 PRSS16Q9NQE7 514 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 ITM2CQ9NQX7 267 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 ASNSD1Q9NWL6 643 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 GOLGA8SH3BPF8 625 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 M0QYT0 321 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 ATP5BP06576 529 aaKnown RBP14.49□□□□□ -0.09
VTI1A-206ENST00000489142 GLI1P08151 1106 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 ENGP17813 658 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 ABCB4P21439 1286 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 CCR1P32246 355 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 SPDYCQ5MJ68 293 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 CCDC183Q5T5S1 534 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 PEAR1Q5VY43 1037 aaPredicted RBP14.49□□□□□ -0.09
VTI1A-206ENST00000489142 NAA35Q5VZE5 725 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 SLC26A9Q7LBE3 791 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 PHLDB2Q86SQ0 1253 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 XYLT1Q86Y38 959 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 CCDC117Q8IWD4 279 aaPredicted RBP14.49□□□□□ -0.09
VTI1A-206ENST00000489142 APCDD1Q8J025 514 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 OR2T3Q8NH03 318 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 EPS8L1Q8TE68 723 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 IGSF8Q969P0 613 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 MYO19Q96H55 970 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 MRGPRX3Q96LB0 322 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 GTPBP2Q9BX10 602 aaKnown RBP14.49□□□□□ -0.09
VTI1A-206ENST00000489142 NUSAP1Q9BXS6 441 aaKnown RBP14.49□□□□□ -0.09
VTI1A-206ENST00000489142 STK33Q9BYT3 514 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 ANLNQ9NQW6 1124 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 ANO10Q9NW15 660 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.49□□□□□ -0.09
VTI1A-206ENST00000489142 WSB2Q9NYS7 404 aaPredicted RBP14.49□□□□□ -0.09
VTI1A-206ENST00000489142 EVLQ9UI08 416 aaPredicted RBP14.49□□□□□ -0.09
VTI1A-206ENST00000489142 SNX10Q9Y5X0 201 aa14.49□□□□□ -0.09
VTI1A-206ENST00000489142 ASCC3Q8N3C0 2202 aaKnown RBP14.49□□□□□ -0.09
VTI1A-206ENST00000489142 MEI4A8MW99 385 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 GIPC1O14908 333 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 ADCY5O95622 1261 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 TPM2P07951 284 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 PDGFRAP16234 1089 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 CDH5P33151 784 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-206ENST00000489142 STK19P49842 368 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-206ENST00000489142 SULT1E1P49888 294 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 COPB1P53618 953 aaKnown RBP14.48□□□□□ -0.09
VTI1A-206ENST00000489142 RPS14P62263 151 aaKnown RBP14.48□□□□□ -0.09
VTI1A-206ENST00000489142 MYL5Q02045 173 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 E2F5Q15329 346 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 SYCP1Q15431 976 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 DUOXA1Q1HG43 343 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 FKBP15Q5T1M5 1219 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 FAM102AQ5T9C2 384 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-206ENST00000489142 PSAPL1Q6NUJ1 521 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 FBXL22Q6P050 247 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 C14orf80Q86SX3 495 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 ERICH1Q86X53 443 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 DHX40Q8IX18 779 aaKnown RBP14.48□□□□□ -0.09
VTI1A-206ENST00000489142 CCAR2Q8N163 923 aaKnown RBP14.48□□□□□ -0.09
VTI1A-206ENST00000489142 TTC17Q96AE7 1141 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 C18orf8Q96DM3 657 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 ZNF419Q96HQ0 510 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-206ENST00000489142 RPL10LQ96L21 214 aaKnown RBP14.48□□□□□ -0.09
VTI1A-206ENST00000489142 PCMTD1Q96MG8 357 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-206ENST00000489142 RPRD1AQ96P16 312 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-206ENST00000489142 IRX2Q9BZI1 471 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-206ENST00000489142 SIK2Q9H0K1 926 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 MIR1-1HGQ9H1L0 117 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 TMPRSS4Q9NRS4 437 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 PIGVQ9NUD9 493 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 TMEM63CQ9P1W3 806 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 SLC12A6Q9UHW9 1150 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 NOCTQ9UK39 431 aaKnown RBP14.48□□□□□ -0.09
VTI1A-206ENST00000489142 VANGL2Q9ULK5 521 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 ERVW-1Q9UQF0 538 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 SIK3Q9Y2K2 1263 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 HS3ST4Q9Y661 456 aa14.48□□□□□ -0.09
VTI1A-206ENST00000489142 TTC34A8MYJ7 566 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 I6L893 689 aaPredicted RBP14.47□□□□□ -0.09
VTI1A-206ENST00000489142 SIN3BO75182 1162 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 PAGE1O75459 146 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 SLC2A3P11169 496 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 MZF1P28698 734 aaPredicted RBP14.47□□□□□ -0.09
VTI1A-206ENST00000489142 NOS2P35228 1153 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 MATKP42679 507 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 NOVA1P51513 510 aaKnown RBP14.47□□□□□ -0.09
VTI1A-206ENST00000489142 JAM2P57087 298 aa14.47□□□□□ -0.09
VTI1A-206ENST00000489142 SNX16P57768 344 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms