RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 TTC17Q96AE7 1141 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 MYO19Q96H55 970 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 PRSS16Q9NQE7 514 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.81■■□□□ 1.4
COL9A3-213ENST00000489045 DDIT4Q9NX09 232 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 COX16Q9P0S2 106 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 NFE2L3Q9Y4A8 694 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 CEP83Q9Y592 693 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 KCNU1A8MYU2 1149 aa23.8■■□□□ 1.4
COL9A3-213ENST00000489045 EEF1GP26641 437 aaKnown RBP23.8■■□□□ 1.4
COL9A3-213ENST00000489045 ATXN3P54252 364 aaPredicted RBP23.8■■□□□ 1.4
COL9A3-213ENST00000489045 BPIFB4P59827 614 aa23.8■■□□□ 1.4
COL9A3-213ENST00000489045 PITRM1Q5JRX3 1037 aa23.8■■□□□ 1.4
COL9A3-213ENST00000489045 KLHDC7AQ5VTJ3 777 aa23.8■■□□□ 1.4
COL9A3-213ENST00000489045 FAM124AQ86V42 546 aa23.8■■□□□ 1.4
COL9A3-213ENST00000489045 CNTNAP3BQ96NU0 1288 aa23.8■■□□□ 1.4
COL9A3-213ENST00000489045 NUP58Q9BVL2 599 aa23.8■■□□□ 1.4
COL9A3-213ENST00000489045 CNTNAP3Q9BZ76 1288 aa23.8■■□□□ 1.4
COL9A3-213ENST00000489045 SYNCQ9H7C4 482 aa23.8■■□□□ 1.4
COL9A3-213ENST00000489045 FBRSQ9HAH7 460 aa23.8■■□□□ 1.4
COL9A3-213ENST00000489045 TAB2Q9NYJ8 693 aa23.8■■□□□ 1.4
COL9A3-213ENST00000489045 SUSD2Q9UGT4 822 aa23.8■■□□□ 1.4
COL9A3-213ENST00000489045 SLC12A6Q9UHW9 1150 aa23.8■■□□□ 1.4
COL9A3-213ENST00000489045 F5H5T6 163 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 H0Y626 953 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 DAB1O75553 588 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 ASLP04424 464 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 SLC2A3P11169 496 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 ABCB4P21439 1286 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 SNX16P57768 344 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 ST8SIA6P61647 398 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 SLC6A3Q01959 620 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 SLC26A9Q7LBE3 791 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 CADM4Q8NFZ8 388 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 GPT2Q8TD30 523 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 RNF34Q969K3 372 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 PRMT1Q99873 361 aaKnown RBP23.79■■□□□ 1.4
COL9A3-213ENST00000489045 NAA15Q9BXJ9 866 aaKnown RBP23.79■■□□□ 1.4
COL9A3-213ENST00000489045 PDCL3Q9H2J4 239 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 MTG2Q9H4K7 406 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 SUN2Q9UH99 717 aa23.79■■□□□ 1.4
COL9A3-213ENST00000489045 ARHGAP33O14559 1287 aa23.78■■□□□ 1.4
COL9A3-213ENST00000489045 C7P10643 843 aa23.78■■□□□ 1.4
COL9A3-213ENST00000489045 UCHL3P15374 230 aa23.78■■□□□ 1.4
COL9A3-213ENST00000489045 GNSP15586 552 aa23.78■■□□□ 1.4
COL9A3-213ENST00000489045 CSRP1P21291 193 aaKnown RBP23.78■■□□□ 1.4
COL9A3-213ENST00000489045 PMLP29590 882 aa23.78■■□□□ 1.4
COL9A3-213ENST00000489045 CCR1P32246 355 aa23.78■■□□□ 1.4
COL9A3-213ENST00000489045 RPS14P62263 151 aaKnown RBP23.78■■□□□ 1.4
COL9A3-213ENST00000489045 PLEKHG6Q3KR16 790 aa23.78■■□□□ 1.4
COL9A3-213ENST00000489045 DCAF12L1Q5VU92 463 aa23.78■■□□□ 1.4
COL9A3-213ENST00000489045 ENOX1Q8TC92 643 aaKnown RBP23.78■■□□□ 1.4
COL9A3-213ENST00000489045 DNASE2BQ8WZ79 361 aa23.78■■□□□ 1.4
COL9A3-213ENST00000489045 MRGPRX3Q96LB0 322 aa23.78■■□□□ 1.4
COL9A3-213ENST00000489045 KIAA1522Q9P206 1035 aaPredicted RBP23.78■■□□□ 1.4
COL9A3-213ENST00000489045 MOCS3O95396 460 aa23.77■■□□□ 1.4
COL9A3-213ENST00000489045 SYPP08247 313 aa23.77■■□□□ 1.4
COL9A3-213ENST00000489045 CYP11B1P15538 503 aa23.77■■□□□ 1.4
COL9A3-213ENST00000489045 CTSOP43234 321 aaPredicted RBP23.77■■□□□ 1.4
COL9A3-213ENST00000489045 NME3Q13232 169 aa23.77■■□□□ 1.4
COL9A3-213ENST00000489045 CIR1Q86X95 450 aaPredicted RBP23.77■■□□□ 1.4
COL9A3-213ENST00000489045 MINDY1Q8N5J2 469 aa23.77■■□□□ 1.4
COL9A3-213ENST00000489045 TMEM35BQ8NCS4 154 aa23.77■■□□□ 1.4
COL9A3-213ENST00000489045 DEFB124Q8NES8 71 aa23.77■■□□□ 1.4
COL9A3-213ENST00000489045 ZNF397Q8NF99 534 aaPredicted RBP23.77■■□□□ 1.4
COL9A3-213ENST00000489045 OR2I1PQ8NGU4 316 aa23.77■■□□□ 1.4
COL9A3-213ENST00000489045 GBP4Q96PP9 640 aa23.77■■□□□ 1.4
COL9A3-213ENST00000489045 MIR1-1HGQ9H1L0 117 aa23.77■■□□□ 1.4
COL9A3-213ENST00000489045 ERVW-1Q9UQF0 538 aa23.77■■□□□ 1.4
COL9A3-213ENST00000489045 CEP295Q9C0D2 2601 aa23.77■■□□□ 1.4
COL9A3-213ENST00000489045 FAM170AA1A519 330 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 METTL12A8MUP2 240 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 DNTTP04053 509 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 CEACAM1P13688 526 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 CDH5P33151 784 aaPredicted RBP23.76■■□□□ 1.39
COL9A3-213ENST00000489045 NOS2P35228 1153 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 ZBTB16Q05516 673 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 ZNF252P-AS1Q0IIN9 211 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 HNRNPA1L2Q32P51 320 aaKnown RBP23.76■■□□□ 1.39
COL9A3-213ENST00000489045 RABGAP1LQ5R372 815 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 CDKAL1Q5VV42 579 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 TAF3Q5VWG9 929 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 ZNF776Q68DI1 518 aaPredicted RBP23.76■■□□□ 1.39
COL9A3-213ENST00000489045 RBM43Q6ZSC3 357 aaKnown RBP23.76■■□□□ 1.39
COL9A3-213ENST00000489045 ZDHHC17Q8IUH5 632 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 APCDD1Q8J025 514 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 CCAR2Q8N163 923 aaKnown RBP23.76■■□□□ 1.39
COL9A3-213ENST00000489045 HDDC3Q8N4P3 179 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 ZCCHC9Q8N567 271 aaKnown RBP23.76■■□□□ 1.39
COL9A3-213ENST00000489045 ANGPTL2Q9UKU9 493 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 EPG5Q9HCE0 2579 aa23.76■■□□□ 1.39
COL9A3-213ENST00000489045 A0A1B0GTW7 788 aa23.75■■□□□ 1.39
COL9A3-213ENST00000489045 F8VZ95 297 aa23.75■■□□□ 1.39
COL9A3-213ENST00000489045 M0QYT0 321 aa23.75■■□□□ 1.39
COL9A3-213ENST00000489045 OPHN1O60890 802 aa23.75■■□□□ 1.39
COL9A3-213ENST00000489045 SIN3BO75182 1162 aa23.75■■□□□ 1.39
COL9A3-213ENST00000489045 SRPRAP08240 638 aaKnown RBP23.75■■□□□ 1.39
COL9A3-213ENST00000489045 ACSL1P33121 698 aa23.75■■□□□ 1.39
COL9A3-213ENST00000489045 TTC31Q49AM3 519 aaPredicted RBP23.75■■□□□ 1.39
COL9A3-213ENST00000489045 TTC39BQ5VTQ0 682 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms