RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 MBOAT7Q96N66 472 aa16.58■□□□□ 0.25
MCF2L-229ENST00000488765 FAM198AQ9UFP1 575 aa16.58■□□□□ 0.25
MCF2L-229ENST00000488765 EIF3DO15371 548 aaKnown RBP eCLIP16.58■□□□□ 0.24
MCF2L-229ENST00000488765 SNNO75324 88 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-229ENST00000488765 HDCP19113 662 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 CLCQ05315 142 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 BFSP2Q13515 415 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 SNRNP35Q16560 246 aaKnown RBP16.58■□□□□ 0.24
MCF2L-229ENST00000488765 CLPPQ16740 277 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-229ENST00000488765 ZBTB49Q6ZSB9 765 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 SV2AQ7L0J3 742 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 DAW1Q8N136 415 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 LARGE2Q8N3Y3 721 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 CHPT1Q8WUD6 406 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 ANKRD36BP1Q96IX9 119 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 FRMD8Q9BZ67 464 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-229ENST00000488765 MIR1-1HGQ9H1L0 117 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-229ENST00000488765 ATP11BQ9Y2G3 1177 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 CENPFP49454 3210 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 CYP3A7-CYP3A51PA0A087WV96 503 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 IQCA1LA6NCM1 817 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 PFDN6O15212 129 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 PSTPIP1O43586 416 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 ART3Q13508 389 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 RAB39AQ14964 217 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 TBCCQ15814 346 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 LIN9Q5TKA1 542 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 CASC4Q6P4E1 433 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 ACER1Q8TDN7 264 aa16.58■□□□□ 0.24
MCF2L-229ENST00000488765 hCG_1818297A0A087WSY0 165 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 HMX2A2RU54 273 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 KLF11O14901 512 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 SULT1C4O75897 302 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 ADORA2AP29274 412 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 HOXA7P31268 230 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-229ENST00000488765 GABPAQ06546 454 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 ASPRV1Q53RT3 343 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 TFDP3Q5H9I0 405 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 UBE2UQ5VVX9 321 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 IL31Q6EBC2 164 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 RCOR2Q8IZ40 523 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 SIX6OS1Q8N1H7 587 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 MPP5Q8N3R9 675 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 FBXL20Q96IG2 436 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 SLC2A11Q9BYW1 496 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 DNAJC28Q9NX36 388 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 TXNDC16Q9P2K2 825 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 ZBBXA8MT70 800 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 ERBB2P04626 1255 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 GRIA1P42261 906 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 GPR162Q16538 588 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 DARS2Q6PI48 645 aaKnown RBP16.57■□□□□ 0.24
MCF2L-229ENST00000488765 CPXCR1Q8N123 301 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 KYQ8NBH2 561 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 PI4KBQ9UBF8 816 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 TNPO2O14787 897 aaKnown RBP16.57■□□□□ 0.24
MCF2L-229ENST00000488765 APOEP02649 317 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 MYCLP1P12525 358 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-229ENST00000488765 TFE3P19532 575 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-229ENST00000488765 FPGSQ05932 587 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 MMRN1Q13201 1228 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 DGKZQ13574 1117 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 DPYSL3Q14195 570 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 KRT39Q6A163 491 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 DHRS4L2Q6PKH6 230 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 RFX6Q8HWS3 928 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 TICAM1Q8IUC6 712 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 EMC1Q8N766 993 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 TMEM102Q8N9M5 508 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-229ENST00000488765 FAR2Q96K12 515 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 APBA2Q99767 749 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 UNKQ9C0B0 810 aaKnown RBP16.57■□□□□ 0.24
MCF2L-229ENST00000488765 SNX25Q9H3E2 840 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 ITGB1BP2Q9UKP3 347 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 VAV3Q9UKW4 847 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 RABL2BQ9UNT1 228 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 ERGIC3Q9Y282 383 aa16.57■□□□□ 0.24
MCF2L-229ENST00000488765 SOCS2O14508 198 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 AKAP10O43572 662 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 MAN1A2O60476 641 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 GRK2P25098 689 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 MYBPC2Q14324 1141 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 ARL13BQ3SXY8 428 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 ZBED5Q49AG3 693 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 FBXL13Q8NEE6 735 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.56■□□□□ 0.24
MCF2L-229ENST00000488765 AURKCQ9UQB9 309 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 FGF3P11487 239 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-229ENST00000488765 IDUAP35475 653 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 TCF7P36402 384 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-229ENST00000488765 RAD23AP54725 363 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 PRKG1Q13976 671 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 POTEAQ6S8J7 498 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 STXBP4Q6ZWJ1 553 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 PODNQ7Z5L7 613 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 SPNS2Q8IVW8 549 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 FEZF2Q8TBJ5 459 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 HTRA1Q92743 480 aa16.56■□□□□ 0.24
MCF2L-229ENST00000488765 HGH1Q9BTY7 390 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms