RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 PITRM1Q5JRX3 1037 aa20■□□□□ 0.79
CD55-209ENST00000488171 FAM183BPQ6ZVS7 135 aa20■□□□□ 0.79
CD55-209ENST00000488171 CHSY1Q86X52 802 aa20■□□□□ 0.79
CD55-209ENST00000488171 HDDC3Q8N4P3 179 aa20■□□□□ 0.79
CD55-209ENST00000488171 PRMT1Q99873 361 aaKnown RBP20■□□□□ 0.79
CD55-209ENST00000488171 NUP62CLQ9H1M0 184 aa20■□□□□ 0.79
CD55-209ENST00000488171 DNAAF2Q9NVR5 837 aaKnown RBP20■□□□□ 0.79
CD55-209ENST00000488171 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20■□□□□ 0.79
CD55-209ENST00000488171 SUN2Q9UH99 717 aa20■□□□□ 0.79
CD55-209ENST00000488171 WASF3Q9UPY6 502 aa20■□□□□ 0.79
CD55-209ENST00000488171 A0A1B0GTW7 788 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 KCNU1A8MYU2 1149 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 GJB3O75712 270 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 GRAP2O75791 330 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 ASLP04424 464 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 ERBB2P04626 1255 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 PRKCSHP14314 528 aaPredicted RBP19.99■□□□□ 0.79
CD55-209ENST00000488171 ACSL1P33121 698 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 KCNMA1Q12791 1236 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 GRIK2Q13002 908 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 EFHC1Q5JVL4 640 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 OLFML1Q6UWY5 402 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 FAM71AQ8IYT1 594 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 ZCCHC9Q8N567 271 aaKnown RBP19.99■□□□□ 0.79
CD55-209ENST00000488171 ATP6V0D2Q8N8Y2 350 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 C1orf216Q8TAB5 229 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 MIR1-1HGQ9H1L0 117 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 PCED1AQ9H1Q7 454 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 SLC32A1Q9H598 525 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 FAM204AQ9H8W3 233 aa19.99■□□□□ 0.79
CD55-209ENST00000488171 H0Y626 953 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 HSF2BPO75031 334 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 CD59P13987 128 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 KRT9P35527 623 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 CTSOP43234 321 aaPredicted RBP19.98■□□□□ 0.79
CD55-209ENST00000488171 CDK17Q00537 523 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 ZBTB16Q05516 673 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 HNRNPA1L2Q32P51 320 aaKnown RBP19.98■□□□□ 0.79
CD55-209ENST00000488171 PTPN20Q4JDL3 420 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 CLEC17AQ6ZS10 378 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 C11orf57Q6ZUT1 292 aaPredicted RBP19.98■□□□□ 0.79
CD55-209ENST00000488171 CCDC117Q8IWD4 279 aaPredicted RBP19.98■□□□□ 0.79
CD55-209ENST00000488171 KDM1BQ8NB78 822 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 NOX5Q96PH1 765 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 RSPH9Q9H1X1 276 aaPredicted RBP19.98■□□□□ 0.79
CD55-209ENST00000488171 C6orf106Q9H6K1 298 aaPredicted RBP19.98■□□□□ 0.79
CD55-209ENST00000488171 PLCB1Q9NQ66 1216 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 DDIT4Q9NX09 232 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 KIAA1522Q9P206 1035 aaPredicted RBP19.98■□□□□ 0.79
CD55-209ENST00000488171 EIF2B4Q9UI10 523 aaKnown RBP19.98■□□□□ 0.79
CD55-209ENST00000488171 DACH1Q9UI36 760 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 ERVW-1Q9UQF0 538 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 ACACBO00763 2458 aa19.98■□□□□ 0.79
CD55-209ENST00000488171 SYNJ2BP-COX16A0A087WUM0 186 aa19.97■□□□□ 0.79
CD55-209ENST00000488171 F5H5T6 163 aa19.97■□□□□ 0.79
CD55-209ENST00000488171 BCAT2O15382 392 aaPredicted RBP19.97■□□□□ 0.79
CD55-209ENST00000488171 SIN3BO75182 1162 aa19.97■□□□□ 0.79
CD55-209ENST00000488171 DNTTP04053 509 aa19.97■□□□□ 0.79
CD55-209ENST00000488171 ST8SIA6P61647 398 aa19.97■□□□□ 0.79
CD55-209ENST00000488171 FOXC1Q12948 553 aa19.97■□□□□ 0.79
CD55-209ENST00000488171 ARID5BQ14865 1188 aa19.97■□□□□ 0.79
CD55-209ENST00000488171 ZNF776Q68DI1 518 aaPredicted RBP19.97■□□□□ 0.79
CD55-209ENST00000488171 OR6B2Q6IFH4 312 aa19.97■□□□□ 0.79
CD55-209ENST00000488171 APCDD1Q8J025 514 aa19.97■□□□□ 0.79
CD55-209ENST00000488171 ZDHHC5Q9C0B5 715 aa19.97■□□□□ 0.79
CD55-209ENST00000488171 SAMSN1Q9NSI8 373 aaKnown RBP19.97■□□□□ 0.79
CD55-209ENST00000488171 COX16Q9P0S2 106 aa19.97■□□□□ 0.79
CD55-209ENST00000488171 FHOD1Q9Y613 1164 aa19.97■□□□□ 0.79
CD55-209ENST00000488171 SLCO1B1Q9Y6L6 691 aa19.97■□□□□ 0.79
CD55-209ENST00000488171 TOP3BO95985 862 aaKnown RBP19.96■□□□□ 0.79
CD55-209ENST00000488171 SRPRAP08240 638 aaKnown RBP19.96■□□□□ 0.79
CD55-209ENST00000488171 SLC2A3P11169 496 aa19.96■□□□□ 0.79
CD55-209ENST00000488171 CCR1P32246 355 aa19.96■□□□□ 0.79
CD55-209ENST00000488171 BNC1Q01954 994 aa19.96■□□□□ 0.79
CD55-209ENST00000488171 SLC6A3Q01959 620 aa19.96■□□□□ 0.79
CD55-209ENST00000488171 KCNJ12Q14500 433 aa19.96■□□□□ 0.79
CD55-209ENST00000488171 DRAP1Q14919 205 aaPredicted RBP19.96■□□□□ 0.79
CD55-209ENST00000488171 C9orf64Q5T6V5 341 aa19.96■□□□□ 0.79
CD55-209ENST00000488171 KLHDC7AQ5VTJ3 777 aa19.96■□□□□ 0.79
CD55-209ENST00000488171 SLC26A9Q7LBE3 791 aa19.96■□□□□ 0.79
CD55-209ENST00000488171 CIR1Q86X95 450 aaPredicted RBP19.96■□□□□ 0.79
CD55-209ENST00000488171 DHX40Q8IX18 779 aaKnown RBP19.96■□□□□ 0.79
CD55-209ENST00000488171 BTBD1Q9H0C5 482 aa19.96■□□□□ 0.79
CD55-209ENST00000488171 LMBRD1Q9NUN5 540 aa19.96■□□□□ 0.79
CD55-209ENST00000488171 SLC12A6Q9UHW9 1150 aa19.96■□□□□ 0.79
CD55-209ENST00000488171 TPRP12270 2363 aaKnown RBP19.96■□□□□ 0.79
CD55-209ENST00000488171 ITIH6Q6UXX5 1313 aa19.96■□□□□ 0.79
CD55-209ENST00000488171 NUMA1Q14980 2115 aa19.96■□□□□ 0.79
CD55-209ENST00000488171 SPAARA0A1B0GVQ0 90 aa19.95■□□□□ 0.79
CD55-209ENST00000488171 TTC34A8MYJ7 566 aa19.95■□□□□ 0.79
CD55-209ENST00000488171 DAB1O75553 588 aa19.95■□□□□ 0.79
CD55-209ENST00000488171 MOCS3O95396 460 aa19.95■□□□□ 0.79
CD55-209ENST00000488171 SEMA4FO95754 770 aa19.95■□□□□ 0.79
CD55-209ENST00000488171 ABCB4P21439 1286 aa19.95■□□□□ 0.79
CD55-209ENST00000488171 BPIFB4P59827 614 aa19.95■□□□□ 0.79
CD55-209ENST00000488171 FAM193AP78312 1265 aa19.95■□□□□ 0.79
CD55-209ENST00000488171 ECT2LQ008S8 904 aa19.95■□□□□ 0.79
CD55-209ENST00000488171 SLC14A1Q13336 389 aa19.95■□□□□ 0.79
CD55-209ENST00000488171 RAPGEF1Q13905 1077 aa19.95■□□□□ 0.79
CD55-209ENST00000488171 TTC31Q49AM3 519 aaPredicted RBP19.95■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms