RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 TRIM67Q6ZTA4 783 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 TPRG1Q6ZUI0 275 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 NUDT18Q6ZVK8 323 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 CHST9Q7L1S5 443 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 FAM72BQ86X60 149 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 CCDC117Q8IWD4 279 aaPredicted RBP13.73□□□□□ -0.21
COL4A6-207ENST00000487645 RHOT1Q8IXI2 618 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 SYCE1Q8N0S2 351 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 SIX5Q8N196 739 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 PYROXD2Q8N2H3 581 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 NAT16Q8N8M0 369 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 LRRC57Q8N9N7 239 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 FIBINQ8TAL6 211 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 FAM71BQ8TC56 605 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 FAM3CQ92520 227 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 CD101Q93033 1021 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 CHFRQ96EP1 664 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 P2RY11Q96G91 374 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 PNKPQ96T60 521 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 EPAS1Q99814 870 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 P2RY13Q9BPV8 354 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 MAGEB5Q9BZ81 275 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 ZYG11BQ9C0D3 744 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 DHX35Q9H5Z1 703 aaKnown RBP13.73□□□□□ -0.21
COL4A6-207ENST00000487645 ZWILCHQ9H900 591 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 DEC1Q9P2X7 70 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 SLC27A6Q9Y2P4 619 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 COL4A3Q01955 1670 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 TECTAO75443 2155 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.72□□□□□ -0.21
COL4A6-207ENST00000487645 GRID2IPA4D2P6 1211 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 SHISA7A6NL88 538 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 H0Y626 953 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 LRIG2O94898 1065 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 MOCS3O95396 460 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 DRD1P21728 446 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 HOXC13P31276 330 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 GGCXP38435 758 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 SLC6A11P48066 632 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 DGKGP49619 791 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 OXCT1P55809 520 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 ZNF177Q13360 481 aaPredicted RBP13.72□□□□□ -0.21
COL4A6-207ENST00000487645 SLC12A1Q13621 1099 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 PDK2Q15119 407 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 CA9Q16790 459 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 TMEM196Q5HYL7 178 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 KCNT1Q5JUK3 1230 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 TXNRD3NBQ6F5E7 133 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 CPNE8Q86YQ8 564 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 MAP7D3Q8IWC1 876 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 CCAR2Q8N163 923 aaKnown RBP13.72□□□□□ -0.21
COL4A6-207ENST00000487645 PHTF2Q8N3S3 785 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 HSPH1Q92598 858 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 BHMTQ93088 406 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 TBC1D31Q96DN5 1066 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 COL25A1Q9BXS0 654 aaPredicted RBP13.72□□□□□ -0.21
COL4A6-207ENST00000487645 LZTFL1Q9NQ48 299 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 DNAJC17Q9NVM6 304 aaKnown RBP13.72□□□□□ -0.21
COL4A6-207ENST00000487645 GPATCH2LQ9NWQ4 482 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 DDX56Q9NY93 547 aaKnown RBP13.72□□□□□ -0.21
COL4A6-207ENST00000487645 DONSONQ9NYP3 566 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 STIM2Q9P246 746 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 TBC1D30Q9Y2I9 924 aa13.72□□□□□ -0.21
COL4A6-207ENST00000487645 KANSL1LA0AUZ9 987 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 WASH4PA8MWX3 477 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 FGF10O15520 208 aaPredicted RBP13.71□□□□□ -0.21
COL4A6-207ENST00000487645 PSTPIP1O43586 416 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 CREB3O43889 395 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 PALMO75781 387 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 LUC7L3O95232 432 aaKnown RBP13.71□□□□□ -0.21
COL4A6-207ENST00000487645 RHOQP17081 205 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 EPHB2P29323 1055 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 GRIA2P42262 883 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 TNFRSF4P43489 277 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 ARSEP51690 589 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 GRSF1Q12849 480 aaKnown RBP eCLIP13.71□□□□□ -0.21
COL4A6-207ENST00000487645 SMTNL2Q2TAL5 461 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 ATP13A4Q4VNC1 1196 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 ALFQ53S48 1182 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 GRAMD4Q6IC98 578 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 TXNDC11Q6PKC3 985 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 KIAA0907Q7Z7F0 614 aaPredicted RBP13.71□□□□□ -0.21
COL4A6-207ENST00000487645 SETD3Q86TU7 594 aaPredicted RBP13.71□□□□□ -0.21
COL4A6-207ENST00000487645 NT5DC3Q86UY8 548 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 C12orf40Q86WS4 652 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 VSIG1Q86XK7 387 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 MFN1Q8IWA4 741 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 REXO1L1PQ8IX06 675 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 CARNMT1Q8N4J0 409 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 KCTD6Q8NC69 237 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 KCTD15Q96SI1 283 aaPredicted RBP13.71□□□□□ -0.21
COL4A6-207ENST00000487645 OSBPL6Q9BZF3 934 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 CATSPERBQ9H7T0 1116 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 ARHGEF4Q9NR80 690 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.71□□□□□ -0.21
COL4A6-207ENST00000487645 KIAA1522Q9P206 1035 aaPredicted RBP13.71□□□□□ -0.21
COL4A6-207ENST00000487645 RCOR3Q9P2K3 495 aaPredicted RBP13.71□□□□□ -0.21
COL4A6-207ENST00000487645 AMFRQ9UKV5 643 aa13.71□□□□□ -0.21
COL4A6-207ENST00000487645 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.71□□□□□ -0.21
COL4A6-207ENST00000487645 HYOU1Q9Y4L1 999 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms