RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 OLFM3Q96PB7 478 aa13.65□□□□□ -0.22
HDLBP-241ENST00000487169 THG1LQ9NWX6 298 aaKnown RBP13.65□□□□□ -0.22
HDLBP-241ENST00000487169 CACNA1FO60840 1977 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 C16orf96A6NNT2 1141 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 GRK3P35626 688 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 NCKAP1LP55160 1127 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 TP53BP2Q13625 1128 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 PKN2Q16513 984 aaKnown RBP13.64□□□□□ -0.23
HDLBP-241ENST00000487169 NEPROQ6NW34 567 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 TRMT11Q7Z4G4 463 aaKnown RBP13.64□□□□□ -0.23
HDLBP-241ENST00000487169 SYTL1Q8IYJ3 562 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 LRRC52Q8N7C0 313 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 DNAJC9Q8WXX5 260 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 ACOX2Q99424 681 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 FTHL17Q9BXU8 183 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 STN1Q9H668 368 aaKnown RBP13.64□□□□□ -0.23
HDLBP-241ENST00000487169 NFAT5O94916 1531 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 RCCD1A6NED2 376 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 IGSF6O95976 241 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 FGFR1P11362 822 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 CYP2C18P33260 490 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 MARCKSL1P49006 195 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 PLK1P53350 603 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 TJAP1Q5JTD0 557 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 RAP1GAP2Q684P5 730 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 COPS7BQ9H9Q2 264 aaPredicted RBP13.64□□□□□ -0.23
HDLBP-241ENST00000487169 NR2E3Q9Y5X4 410 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 RAD54BQ9Y620 910 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 ATRNO75882 1429 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 A8MX80 341 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 FAAP100Q0VG06 881 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 RASA2Q15283 850 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 AGKQ53H12 422 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 CCDC157Q569K6 752 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 SLC45A4Q5BKX6 768 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 PDPK2PQ6A1A2 396 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 SH3BP5LQ7L8J4 393 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 GLT6D1Q7Z4J2 308 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 IRF2BP1Q8IU81 584 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 FAM9CQ8IZT9 166 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 USP6NLQ92738 828 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 GPR20Q99678 358 aa13.64□□□□□ -0.23
HDLBP-241ENST00000487169 NT5C1B-RDH14C9J2C7 533 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 IFRD1O00458 451 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-241ENST00000487169 ELNP15502 786 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 PGAM1P18669 254 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 GRM5P41594 1212 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 MARSP56192 900 aaKnown RBP13.63□□□□□ -0.23
HDLBP-241ENST00000487169 CDK16Q00536 496 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 ZNF844Q08AG5 666 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 PARP6Q2NL67 630 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 ARMC12Q5T9G4 340 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 ANKS6Q68DC2 871 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 CAPRIN2Q6IMN6 1127 aaKnown RBP13.63□□□□□ -0.23
HDLBP-241ENST00000487169 RD3Q7Z3Z2 195 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 IRF2BP2Q7Z5L9 587 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 HORMAD1Q86X24 394 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 C18orf25Q96B23 403 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-241ENST00000487169 LRRC39Q96DD0 335 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 ABHD8Q96I13 439 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 RNF157Q96PX1 679 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 IGFLR1Q9H665 355 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 CD248Q9HCU0 757 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 DYRK1BQ9Y463 629 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 KRT6AP02538 564 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 KRT6BP04259 564 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 RPL9P32969 192 aaKnown RBP13.63□□□□□ -0.23
HDLBP-241ENST00000487169 ABCG1P45844 678 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 BRCC3P46736 316 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 KRT6CP48668 564 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 CCDC85BQ15834 202 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-241ENST00000487169 ATP6AP1LQ52LC2 224 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 DEFB118Q96PH6 123 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 PARVBQ9HBI1 364 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 SLC24A3Q9HC58 644 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 SLC40A1Q9NP59 571 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 TBC1D4O60343 1298 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 USP2O75604 605 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-241ENST00000487169 ATP5BP06576 529 aaKnown RBP13.63□□□□□ -0.23
HDLBP-241ENST00000487169 ACADMP11310 421 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 MSH3P20585 1137 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 SWT1Q5T5J6 900 aaKnown RBP13.63□□□□□ -0.23
HDLBP-241ENST00000487169 SLC22A9Q8IVM8 553 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 FBXO39Q8N4B4 442 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 NLGN2Q8NFZ4 835 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 PPTC7Q8NI37 304 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 APBB2Q92870 758 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 SLC27A5Q9Y2P5 690 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 CRYL1Q9Y2S2 319 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 ZNF541Q9H0D2 1346 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 A0A0A0MRY4 1105 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 TBC1D3BA6NDS4 549 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 BUD23O43709 281 aaKnown RBP13.63□□□□□ -0.23
HDLBP-241ENST00000487169 FKTNO75072 461 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 ERCC2P18074 760 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 PRKAA1Q13131 559 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 NFYCQ13952 458 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 PLCL1Q15111 1095 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 DAB2IPQ5VWQ8 1189 aa13.63□□□□□ -0.23
HDLBP-241ENST00000487169 C16orf87Q6PH81 154 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms