RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 PRUNE1Q86TP1 453 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 ITIH5Q86UX2 942 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 FAM72BQ86X60 149 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 RELL1Q8IUW5 271 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 HERC6Q8IVU3 1022 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 TCEAL8Q8IYN2 117 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 CCNYQ8ND76 341 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 HTR3CQ8WXA8 447 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 SLC39A7Q92504 469 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 PRCCQ92733 491 aaPredicted RBP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 CLP1Q92989 425 aaKnown RBP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 TRMT2BQ96GJ1 504 aaKnown RBP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 SLC39A13Q96H72 371 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 FCRL2Q96LA5 508 aaPredicted RBP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 C1orf74Q96LT6 269 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 ZNF512Q96ME7 567 aaPredicted RBP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 TTC25Q96NG3 672 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 CCDC77Q9BR77 488 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 NACA2Q9H009 215 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 KLC2Q9H0B6 622 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 ZBP1Q9H171 429 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 ADAM7Q9H2U9 754 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 C10orf88Q9H8K7 445 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 USP29Q9HBJ7 922 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 RXFP1Q9HBX9 757 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 ANLNQ9NQW6 1124 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 ETNK2Q9NVF9 386 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 OSER1Q9NX31 292 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 DNMT3LQ9UJW3 386 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 NUDT5Q9UKK9 219 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 HBS1LQ9Y450 684 aaKnown RBP7.26□□□□□ -1.25
SF3A3-206ENST00000487062 YIPF1Q9Y548 306 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 ASB3Q9Y575 518 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 DOCK4Q8N1I0 1966 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 CLUHO75153 1309 aa7.26□□□□□ -1.25
SF3A3-206ENST00000487062 ANAPC1Q9H1A4 1944 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 MTCL1Q9Y4B5 1905 aaKnown RBP7.25□□□□□ -1.25
SF3A3-206ENST00000487062 CFAP99D6REC4 459 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 E7EVH7 732 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 E9PAM4 449 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 H3BQF6 201 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 I6L893 689 aaPredicted RBP7.25□□□□□ -1.25
SF3A3-206ENST00000487062 AGPSO00116 658 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 TP73O15350 636 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 RIPK2O43353 540 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 ATP9BO43861 1147 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 TLL1O43897 1013 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 TLR5O60602 858 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 OPHN1O60890 802 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 RNF40O75150 1001 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 MAP3K6O95382 1288 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 SEC24AO95486 1093 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 CXCL14O95715 111 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 SYF2O95926 243 aaKnown RBP7.25□□□□□ -1.25
SF3A3-206ENST00000487062 MOCS2O96007 188 aaPredicted RBP7.25□□□□□ -1.25
SF3A3-206ENST00000487062 ADH1AP07327 375 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 ATP2A2P16615 1042 aaKnown RBP7.25□□□□□ -1.25
SF3A3-206ENST00000487062 HOXC13P31276 330 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 CHKAP35790 457 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 FDFT1P37268 417 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 MAGEA4P43358 317 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 PGFP49763 221 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 TUBP50607 506 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 MLLT6P55198 1093 aaPredicted RBP7.25□□□□□ -1.25
SF3A3-206ENST00000487062 SARNPP82979 210 aaKnown RBP7.25□□□□□ -1.25
SF3A3-206ENST00000487062 CBX1P83916 185 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 ZNF33AQ06730 810 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 SLC29A2Q14542 456 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 PRKD1Q15139 912 aaPredicted RBP7.25□□□□□ -1.25
SF3A3-206ENST00000487062 HIF1AQ16665 826 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 KCTD19Q17RG1 926 aaPredicted RBP7.25□□□□□ -1.25
SF3A3-206ENST00000487062 KRT71Q3SY84 523 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 HECTD3Q5T447 861 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 MANEALQ5VSG8 457 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 KLHDC10Q6PID8 442 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 CCDC149Q6ZUS6 474 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 TMC7Q7Z402 723 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 MIB1Q86YT6 1006 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 LRRC49Q8IUZ0 686 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 PDIK1LQ8N165 341 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 NAT8LQ8N9F0 302 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 KLHL23Q8NBE8 558 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 CPT1BQ92523 772 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 EXOC4Q96A65 974 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 HDAC11Q96DB2 347 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 BTN2A3PQ96KV6 586 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 MYRFLQ96LU7 910 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 RBM15Q96T37 977 aaKnown RBP eCLIP7.25□□□□□ -1.25
SF3A3-206ENST00000487062 SH3GL2Q99962 352 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 EMILIN2Q9BXX0 1053 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 ROPN1BQ9BZX4 212 aaPredicted RBP7.25□□□□□ -1.25
SF3A3-206ENST00000487062 CDC42EP4Q9H3Q1 356 aaKnown RBP7.25□□□□□ -1.25
SF3A3-206ENST00000487062 SEMA4AQ9H3S1 761 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 PRDM12Q9H4Q4 367 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 ROPN1Q9HAT0 212 aaPredicted RBP7.25□□□□□ -1.25
SF3A3-206ENST00000487062 SAYSD1Q9NPB0 183 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 RAB6BQ9NRW1 208 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 SEPT10Q9P0V9 454 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 ZMIZ1Q9ULJ6 1067 aa7.25□□□□□ -1.25
SF3A3-206ENST00000487062 LZTS1Q9Y250 596 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms