RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 TBC1D5Q92609 795 aa3.99□□□□□ -1.77
SNRNP27-204ENST00000487029 NPIPB3Q92617 1050 aa3.99□□□□□ -1.77
SNRNP27-204ENST00000487029 PRR11Q96HE9 360 aaPredicted RBP3.99□□□□□ -1.77
SNRNP27-204ENST00000487029 C5orf34Q96MH7 638 aa3.99□□□□□ -1.77
SNRNP27-204ENST00000487029 UBA5Q9GZZ9 404 aa3.99□□□□□ -1.77
SNRNP27-204ENST00000487029 USP29Q9HBJ7 922 aa3.99□□□□□ -1.77
SNRNP27-204ENST00000487029 RIC8AQ9NPQ8 531 aa3.99□□□□□ -1.77
SNRNP27-204ENST00000487029 TMLHEQ9NVH6 421 aa3.99□□□□□ -1.77
SNRNP27-204ENST00000487029 WWOXQ9NZC7 414 aa3.99□□□□□ -1.77
SNRNP27-204ENST00000487029 ZNF69Q9UC07 566 aa3.99□□□□□ -1.77
SNRNP27-204ENST00000487029 ANAPC4Q9UJX5 808 aa3.99□□□□□ -1.77
SNRNP27-204ENST00000487029 PCDHB2Q9Y5E7 798 aa3.99□□□□□ -1.77
SNRNP27-204ENST00000487029 FAM90A20PA6NIJ5 464 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 MBD3L5A6NJ08 208 aaPredicted RBP3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 PRAMEF2O60811 474 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 PDE8BO95263 885 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 AGR2O95994 175 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 PYGLP06737 847 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 RXRAP19793 462 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 RBM5P52756 815 aaKnown RBP eCLIP3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 RPL15P61313 204 aaKnown RBP3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 RBM6P78332 1123 aaKnown RBP3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 GPC5P78333 572 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 CFHR3Q02985 330 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 RNASE12Q5GAN4 147 aaKnown RBP3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 TMEM63BQ5T3F8 832 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 PXDC1Q5TGL8 231 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 KIRREL2Q6UWL6 708 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 C16orf89Q6UX73 402 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 SYT13Q7L8C5 426 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 CPOQ8IVL8 374 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 RBMXL3Q8N7X1 1067 aaKnown RBP3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 IL17REQ8NFR9 667 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 CEP70Q8NHQ1 597 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 GLMPQ8WWB7 406 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 HERVK_113Q902F9 699 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 EDC3Q96F86 508 aaKnown RBP3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 COG8Q96MW5 612 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 SNX18Q96RF0 628 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 MACROD1Q9BQ69 325 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 ABHD16BQ9H3Z7 469 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 CDCP1Q9H5V8 836 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 CHODLQ9H9P2 273 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 KCND3Q9UK17 655 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 BAG5Q9UL15 447 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 RAB21Q9UL25 225 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 TRPC5Q9UL62 973 aaPredicted RBP3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 DERAQ9Y315 318 aa3.98□□□□□ -1.77
SNRNP27-204ENST00000487029 TBC1D3DA0A087WVF3 549 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TBC1D3IA0A087WXS9 549 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TBC1D3EA0A087X179 549 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TBC1D3KA0A087X1G2 549 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 A0A1B0GVC2 190 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TBC1D3BA6NDS4 549 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TBC1D3FA6NER0 549 aaPredicted RBP3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 MYMKA6NI61 221 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TBC1D3LB9A6J9 549 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 WDHD1O75717 1129 aaPredicted RBP3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 MBPP02686 304 aaPredicted RBP3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 POLBP06746 335 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TBC1D3HP0C7X1 549 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 CD53P19397 219 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 CNTFP26441 200 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 DUSP1P28562 367 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 GALNSP34059 522 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 GRK5P34947 590 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 JAK3P52333 1124 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 COPB1P53618 953 aaKnown RBP3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 FAM3BP58499 235 aaPredicted RBP3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 CYP4F2P78329 520 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 RAE1P78406 368 aaKnown RBP3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TLE3Q04726 772 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 RNASELQ05823 741 aaKnown RBP3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 SLC12A1Q13621 1099 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TRIP6Q15654 476 aaKnown RBP3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 JAKMIP3Q5VZ66 844 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TBC1D3GQ6DHY5 549 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TBC1D3CQ6IPX1 549 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 NAPRTQ6XQN6 538 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 RASGRP2Q7LDG7 609 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 SLC29A4Q7RTT9 530 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TBC1D3Q8IZP1 549 aaPredicted RBP3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 LINC01465Q8N7H1 131 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 NANOGP1Q8N7R0 232 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TERB1Q8NA31 727 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 C8orf58Q8NAV2 365 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 SLC2A12Q8TD20 617 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 ASB12Q8WXK4 309 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 MARK4Q96L34 752 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TWNKQ96RR1 684 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 MMS19Q96T76 1030 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 EIF2AK1Q9BQI3 630 aaKnown RBP3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 CIPCQ9C0C6 399 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 MAF1Q9H063 256 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 NOD2Q9HC29 1040 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 ABHD10Q9NUJ1 306 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TRNAU1APQ9NX07 287 aaKnown RBP3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 TFCP2L1Q9NZI6 479 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 PI4KBQ9UBF8 816 aa3.97□□□□□ -1.77
SNRNP27-204ENST00000487029 FZD4Q9ULV1 537 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms