RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 SLC26A9Q7LBE3 791 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 SPATA24Q86W54 205 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 TMEM86AQ8N2M4 240 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 SYBUQ9NX95 663 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 DNM1LO00429 736 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 PIRTP0C851 137 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 GEMP55040 296 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 FKBP1BP68106 108 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 BST1Q10588 318 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 PARP6Q2NL67 630 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 CERCAMQ5T4B2 595 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 MARC1Q5VT66 337 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 ZNF470Q6ECI4 717 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 FRA10AC1Q70Z53 315 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 OTOAQ7RTW8 1153 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 PHF21BQ96EK2 531 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 ASIC4Q96FT7 647 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 PEBP4Q96S96 227 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 TRMT13Q9NUP7 481 aaKnown RBP13.54□□□□□ -0.24
HMGN1-216ENST00000486741 DCDC2Q9UHG0 476 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 PGAP2Q9UHJ9 254 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 ANGPTL2Q9UKU9 493 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 SCN9AQ15858 1988 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 CBX4O00257 560 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 TRDMT1O14717 391 aaKnown RBP13.54□□□□□ -0.24
HMGN1-216ENST00000486741 NDUFS3O75489 264 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 METTL18O95568 372 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 OR1E1P30953 314 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 CDH17Q12864 832 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 RASIP1Q5U651 963 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 ZNF280DQ6N043 979 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 DPY19L2P1Q6NXN4 242 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 HFE2Q6ZVN8 426 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 PIP4K2CQ8TBX8 421 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 SLC17A6Q9P2U8 582 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 CDH9Q9ULB4 789 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 PCDHB5Q9Y5E4 795 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 UGT1A9O60656 530 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 SUPT7LO94864 414 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 PGAM1P18669 254 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 HDAC4P56524 1084 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 CRHR2Q13324 411 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 PDK4Q16654 411 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 MAST2Q6P0Q8 1798 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 UNC5BQ8IZJ1 945 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 ADGRA2Q96PE1 1338 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 CAB39LQ9H9S4 337 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 UGT1A7Q9HAW7 530 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 UGT1A10Q9HAW8 530 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 UGT1A8Q9HAW9 530 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 ARHGEF4Q9NR80 690 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 MFHAS1Q9Y4C4 1052 aa13.54□□□□□ -0.24
HMGN1-216ENST00000486741 ARL5CA6NH57 179 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 NCF1BA6NI72 391 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-216ENST00000486741 NCF1CA8MVU1 366 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-216ENST00000486741 ZBTB48P10074 688 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-216ENST00000486741 NCF1P14598 390 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-216ENST00000486741 CCNJLQ8IV13 435 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 CMASQ8NFW8 434 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-216ENST00000486741 SCAMP5Q8TAC9 235 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 TMEM169Q96HH4 297 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 EGFL8Q99944 293 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 BCO2Q9BYV7 579 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 IL1RL2Q9HB29 575 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 MEI4A8MW99 385 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 PSMD3O43242 534 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 STMN1P16949 149 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 SERPINB8P50452 374 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 RAB27AP51159 221 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 SLC25A11Q02978 314 aaKnown RBP13.53□□□□□ -0.24
HMGN1-216ENST00000486741 RAP1GAP2Q684P5 730 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 VSTM1Q6UX27 236 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 PSTKQ8IV42 348 aaKnown RBP13.53□□□□□ -0.24
HMGN1-216ENST00000486741 TOP6BLQ8N6T0 577 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 SERPINI1Q99574 410 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 OSBPL1AQ9BXW6 950 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 NUF2Q9BZD4 464 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 EPS15L1Q9UBC2 864 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 EFR3BQ9Y2G0 817 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 ACOT9Q9Y305 439 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 LAMB1P07942 1786 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.53□□□□□ -0.24
HMGN1-216ENST00000486741 NCAM2O15394 837 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 KIF1CO43896 1103 aaKnown RBP13.53□□□□□ -0.24
HMGN1-216ENST00000486741 YWHAQP27348 245 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 ALDH1A3P47895 512 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 NME5P56597 212 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 ITGA7Q13683 1181 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 OTOP3Q7RTS5 596 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 KLHL5Q96PQ7 755 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 GCNAQ96QF7 691 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 YIPF3Q9GZM5 350 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 RABGEF1Q9UJ41 708 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 F5H5T6 163 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 TIMM44O43615 452 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 FSBPO95073 299 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 ANP32DO95626 131 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 KLRC2P26717 231 aa13.53□□□□□ -0.24
HMGN1-216ENST00000486741 SP3Q02447 781 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms