RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 STXBP5Q5T5C0 1151 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 ADGRF1Q5T601 910 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 RAP1GAP2Q684P5 730 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 TMCO3Q6UWJ1 677 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 TMEM150AQ86TG1 271 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 NPAS3Q8IXF0 933 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 LGI2Q8N0V4 545 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 CCDC185Q8N715 623 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 KIAA1958Q8N8K9 716 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 TTC13Q8NBP0 860 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 CSGALNACT1Q8TDX6 532 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 DDI1Q8WTU0 396 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 DEPDC1BQ8WUY9 529 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 NSMCE1Q8WV22 266 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 ATP2A3Q93084 1043 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 NXPE3Q969Y0 559 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 RNF25Q96BH1 459 aaPredicted RBP7.18□□□□□ -1.26
UBR4-214ENST00000486515 TMA16Q96EY4 203 aaKnown RBP7.18□□□□□ -1.26
UBR4-214ENST00000486515 HES6Q96HZ4 224 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 MSLNLQ96KJ4 702 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 ASB16Q96NS5 453 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 XPO6Q96QU8 1125 aaKnown RBP7.18□□□□□ -1.26
UBR4-214ENST00000486515 ZNF670Q9BS34 389 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 SNRNP25Q9BV90 132 aaKnown RBP7.18□□□□□ -1.26
UBR4-214ENST00000486515 ZYG11BQ9C0D3 744 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 RNF38Q9H0F5 515 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 OSBPL2Q9H1P3 480 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 S1PR5Q9H228 398 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 GOLPH3Q9H4A6 298 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 RETREG1Q9H6L5 497 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 HOMER3Q9NSC5 361 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 DUS2Q9NX74 493 aaKnown RBP7.18□□□□□ -1.26
UBR4-214ENST00000486515 ARHGEF38Q9NXL2 777 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.18□□□□□ -1.26
UBR4-214ENST00000486515 RCOR3Q9P2K3 495 aaPredicted RBP7.18□□□□□ -1.26
UBR4-214ENST00000486515 AGO1Q9UL18 857 aaKnown RBP7.18□□□□□ -1.26
UBR4-214ENST00000486515 HPCAL4Q9UM19 191 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 SNX12Q9UMY4 172 aa7.18□□□□□ -1.26
UBR4-214ENST00000486515 DCDC2BA2VCK2 349 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 E9PAM4 449 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 PGRMC1O00264 195 aaKnown RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 CES2O00748 559 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 APOL1O14791 398 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 MBTPS2O43462 519 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 CLDN11O75508 207 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 STK10O94804 968 aaKnown RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 PAPLNO95428 1278 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 ATP1A1P05023 1023 aaKnown RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 LAMP2P13473 410 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 TFE3P19532 575 aaPredicted RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 TACR2P21452 398 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 SP100P23497 879 aaPredicted RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 KDELR1P24390 212 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 CXCR5P32302 372 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 ACTN2P35609 894 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 PGFP49763 221 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 MLLT6P55198 1093 aaPredicted RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 TAS2R40P59535 323 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 DYNLT1P63172 113 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 PITX1P78337 314 aaPredicted RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 SLC25A11Q02978 314 aaKnown RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 GAD2Q05329 585 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 DLX2Q07687 328 aaPredicted RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 ZNF252P-AS1Q0IIN9 211 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 CDH18Q13634 790 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 PDGFRLQ15198 375 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 E2F5Q15329 346 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 SMAD2Q15796 467 aaKnown RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 PPP2R5EQ16537 467 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 DPYSL2Q16555 572 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 ANO4Q32M45 955 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 C6orf118Q5T5N4 469 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 DAB2IPQ5VWQ8 1189 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 TRNP1Q6NT89 227 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 NYAP1Q6ZVC0 841 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 HTR3DQ70Z44 454 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 VSIG1Q86XK7 387 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 CPA6Q8N4T0 437 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 LZTR1Q8N653 840 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 HJURPQ8NCD3 748 aaPredicted RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 P3H4Q92791 437 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 USP13Q92995 863 aaPredicted RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 ELSPBP1Q96BH3 223 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 SLC39A13Q96H72 371 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 RPGRIP1Q96KN7 1286 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 CAPZA3Q96KX2 299 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 WDR24Q96S15 920 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 OSBPL9Q96SU4 736 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 TRMT61BQ9BVS5 477 aaKnown RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 PHF7Q9BWX1 381 aaPredicted RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 OSBPL8Q9BZF1 889 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 SMG9Q9H0W8 520 aaKnown RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 POMKQ9H5K3 350 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 BRD9Q9H8M2 597 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 KLHL11Q9NVR0 708 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 GPATCH2LQ9NWQ4 482 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 FEZ2Q9UHY8 353 aaPredicted RBP7.17□□□□□ -1.26
UBR4-214ENST00000486515 VANGL2Q9ULK5 521 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 EFR3BQ9Y2G0 817 aa7.17□□□□□ -1.26
UBR4-214ENST00000486515 PTPRDP23468 1912 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms