RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 PAXBP1Q9Y5B6 917 aa10.28□□□□□ -0.76
SND1-213ENST00000486037 CSMD1Q96PZ7 3565 aa10.28□□□□□ -0.76
SND1-213ENST00000486037 DFNA5O60443 496 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 USP12O75317 370 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 IL18RAPO95256 599 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 AFPP02771 609 aaKnown RBP10.27□□□□□ -0.77
SND1-213ENST00000486037 WARSP23381 471 aaKnown RBP10.27□□□□□ -0.77
SND1-213ENST00000486037 ACP1P24666 158 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 MTIF2P46199 727 aaKnown RBP10.27□□□□□ -0.77
SND1-213ENST00000486037 CASP4P49662 377 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 SLC5A3P53794 718 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 MARSP56192 900 aaKnown RBP10.27□□□□□ -0.77
SND1-213ENST00000486037 RACK1P63244 317 aaKnown RBP10.27□□□□□ -0.77
SND1-213ENST00000486037 SKOR1P84550 965 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 ILKQ13418 452 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 FYB2Q5VWT5 728 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 CDCP2Q5VXM1 449 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 Q6ZNB5 142 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 NT5DC4Q86YG4 428 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 BRSK2Q8IWQ3 736 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 C12orf56Q8IXR9 622 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 SPC24Q8NBT2 197 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 PDZD8Q8NEN9 1154 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 GOLGA5Q8TBA6 731 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 OVCA2Q8WZ82 227 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 DPH1Q9BZG8 443 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 BTBD1Q9H0C5 482 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 OSER1Q9NX31 292 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 EHD2Q9NZN4 543 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 ITGA11Q9UKX5 1188 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 NBASA2RRP1 2371 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 ABCA12Q86UK0 2595 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 COL27A1Q8IZC6 1860 aaPredicted RBP10.27□□□□□ -0.77
SND1-213ENST00000486037 DOPEY1Q5JWR5 2465 aa10.27□□□□□ -0.77
SND1-213ENST00000486037 A0A1W2PPC4 97 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 CLEC18AA5D8T8 446 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 GOLGA8IPA6NC78 632 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 GOLGA8JA6NMD2 632 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 LGALS16A8MUM7 142 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 TRIM38O00635 465 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 TLR5O60602 858 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 GNA14O95837 355 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 PENKP01210 267 aaPredicted RBP10.26□□□□□ -0.77
SND1-213ENST00000486037 RPL13P26373 211 aaKnown RBP10.26□□□□□ -0.77
SND1-213ENST00000486037 PBX1P40424 430 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 TUBP50607 506 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 CYP2J2P51589 502 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 ZNF132P52740 706 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 BCAT1P54687 386 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 ERVPABLB-1P60509 514 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 RPS14P62263 151 aaKnown RBP10.26□□□□□ -0.77
SND1-213ENST00000486037 RBP5P82980 135 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 TLE1Q04724 770 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 SRSF6Q13247 344 aaKnown RBP10.26□□□□□ -0.77
SND1-213ENST00000486037 CAMK2GQ13555 558 aaPredicted RBP10.26□□□□□ -0.77
SND1-213ENST00000486037 MAPRE1Q15691 268 aaKnown RBP10.26□□□□□ -0.77
SND1-213ENST00000486037 CCDC40Q4G0X9 1142 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 FILIP1LQ4L180 1135 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 MIIPQ5JXC2 388 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 KIAA0895LQ68EN5 471 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 CLEC18BQ6UXF7 455 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 PAQR9Q6ZVX9 377 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 SLC9A9Q8IVB4 645 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 VSTM4Q8IW00 320 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 TRIM59Q8IWR1 403 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 CLEC18CQ8NCF0 446 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 ANKRD20A12PQ8NF67 263 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 OR5B17Q8NGF7 314 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 TMEM174Q8WUU8 243 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 POMGNT1Q8WZA1 660 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 PSMG3-AS1Q96PY0 264 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 CBWD1Q9BRT8 395 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 TUBGCP2Q9BSJ2 902 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 PDE11AQ9HCR9 933 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 ELOVL2Q9NXB9 296 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 IL37Q9NZH6 218 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 CGNQ9P2M7 1197 aaKnown RBP10.26□□□□□ -0.77
SND1-213ENST00000486037 SERGEFQ9UGK8 458 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 NUDT5Q9UKK9 219 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 SRPK3Q9UPE1 567 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 EXOC7Q9UPT5 735 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 MAN2B2Q9Y2E5 1009 aa10.26□□□□□ -0.77
SND1-213ENST00000486037 FAM47DPA6NHR8 397 aa10.25□□□□□ -0.77
SND1-213ENST00000486037 SLC16A3O15427 465 aaKnown RBP10.25□□□□□ -0.77
SND1-213ENST00000486037 SIGLEC6O43699 453 aa10.25□□□□□ -0.77
SND1-213ENST00000486037 SDC3O75056 442 aa10.25□□□□□ -0.77
SND1-213ENST00000486037 KLKB1P03952 638 aa10.25□□□□□ -0.77
SND1-213ENST00000486037 FAM87AP0C7U9 286 aa10.25□□□□□ -0.77
SND1-213ENST00000486037 C7P10643 843 aa10.25□□□□□ -0.77
SND1-213ENST00000486037 PTPN1P18031 435 aaKnown RBP10.25□□□□□ -0.77
SND1-213ENST00000486037 SCP2P22307 547 aa10.25□□□□□ -0.77
SND1-213ENST00000486037 ABCD1P33897 745 aa10.25□□□□□ -0.77
SND1-213ENST00000486037 LSSP48449 732 aa10.25□□□□□ -0.77
SND1-213ENST00000486037 NXPH1P58417 271 aa10.25□□□□□ -0.77
SND1-213ENST00000486037 SNRPFP62306 86 aaKnown RBP10.25□□□□□ -0.77
SND1-213ENST00000486037 POU5F1Q01860 360 aaKnown RBP10.25□□□□□ -0.77
SND1-213ENST00000486037 CLN3Q13286 438 aa10.25□□□□□ -0.77
SND1-213ENST00000486037 MAN2A1Q16706 1144 aa10.25□□□□□ -0.77
SND1-213ENST00000486037 VWA3BQ502W6 1294 aa10.25□□□□□ -0.77
SND1-213ENST00000486037 CEP135Q66GS9 1140 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms