RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 HARS2P49590 506 aaKnown RBP17.66■□□□□ 0.42
VIM-205ENST00000485947 DAOAP59103 153 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 BYSLQ13895 437 aaKnown RBP17.66■□□□□ 0.42
VIM-205ENST00000485947 CSRP2Q16527 193 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 C11orf63Q6NUN7 778 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 PMF1Q6P1K2 205 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 BEND5Q7L4P6 421 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 BHLHA9Q7RTU4 235 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 FAM217AQ8IXS0 508 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 FAM160A2Q8N612 972 aaPredicted RBP17.66■□□□□ 0.42
VIM-205ENST00000485947 GOLGA1Q92805 767 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 HHIPQ96QV1 700 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 SELENOOQ9BVL4 669 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 SLC2A11Q9BYW1 496 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 DNAJC17Q9NVM6 304 aaKnown RBP17.66■□□□□ 0.42
VIM-205ENST00000485947 DNAI1Q9UI46 699 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 STOML2Q9UJZ1 356 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 NUDT5Q9UKK9 219 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 SLC27A6Q9Y2P4 619 aa17.66■□□□□ 0.42
VIM-205ENST00000485947 MYO16Q9Y6X6 1858 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 BAHCC1Q9P281 2608 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 FAM170AA1A519 330 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 GRID2IPA4D2P6 1211 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 E5RJQ4 531 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 TULP2O00295 520 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 GFRA2O00451 464 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 MDM4O15151 490 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 PALMO75781 387 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 KLKB1P03952 638 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 CORO1AP31146 461 aaKnown RBP17.65■□□□□ 0.42
VIM-205ENST00000485947 RGS7P49802 495 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 SEC13P55735 322 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 MAMLD1Q13495 774 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 ELF2Q15723 593 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 SDE2Q6IQ49 451 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 MSANTD2Q6P1R3 559 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 NAT16Q8N8M0 369 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 TXNDC5Q8NBS9 432 aaKnown RBP17.65■□□□□ 0.42
VIM-205ENST00000485947 WDR24Q96S15 920 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 NAPGQ99747 312 aaPredicted RBP17.65■□□□□ 0.42
VIM-205ENST00000485947 JRKLQ9Y4A0 524 aa17.65■□□□□ 0.42
VIM-205ENST00000485947 SLC12A8A0AV02 714 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 CTAGE9A4FU28 777 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 SIGLEC16A6NMB1 481 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 YJEFN3A6XGL0 299 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 E7ENQ6 273 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 ZBTB24O43167 697 aaPredicted RBP17.64■□□□□ 0.41
VIM-205ENST00000485947 EPN2O95208 641 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 KLF8O95600 359 aaPredicted RBP17.64■□□□□ 0.41
VIM-205ENST00000485947 NTSR1P30989 418 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 TIE1P35590 1138 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 DGKGP49619 791 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 KDSRQ06136 332 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 RING1Q06587 406 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 SRSF5Q13243 272 aaKnown RBP17.64■□□□□ 0.41
VIM-205ENST00000485947 C2CD6Q53TS8 623 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 PPP1R15BQ5SWA1 713 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 OR6B2Q6IFH4 312 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 TPGS1Q6ZTW0 290 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 SLFN11Q7Z7L1 901 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 DAAM2Q86T65 1068 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 ALLCQ8N6M5 410 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 ZNF513Q8N8E2 541 aaPredicted RBP17.64■□□□□ 0.41
VIM-205ENST00000485947 LRRC57Q8N9N7 239 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 AZIN2Q96A70 460 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 TJP2Q9UDY2 1190 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 ANAPC7Q9UJX3 599 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 AGO1Q9UL18 857 aaKnown RBP17.64■□□□□ 0.41
VIM-205ENST00000485947 USP18Q9UMW8 372 aa17.64■□□□□ 0.41
VIM-205ENST00000485947 BUB1BO60566 1050 aaPredicted RBP17.63■□□□□ 0.41
VIM-205ENST00000485947 CISD3P0C7P0 127 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 KRT3P12035 628 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 HNRNPLP14866 589 aaKnown RBP eCLIP17.63■□□□□ 0.41
VIM-205ENST00000485947 PXNP49023 591 aaPredicted RBP17.63■□□□□ 0.41
VIM-205ENST00000485947 MESP2Q0VG99 397 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 NNTQ13423 1086 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 LPAL2Q16609 132 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 PLK5Q496M5 336 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 SPDYCQ5MJ68 293 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 NUGGCQ68CJ6 796 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 DCUN1D2Q6PH85 259 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 OLFML1Q6UWY5 402 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 FAM183BPQ6ZVS7 135 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 DENND1CQ8IV53 801 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 UNC45BQ8IWX7 931 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 CCDC33Q8N5R6 958 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 ZNF557Q8N988 423 aaPredicted RBP17.63■□□□□ 0.41
VIM-205ENST00000485947 FNIP1Q8TF40 1166 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 SEMA4GQ9NTN9 838 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 CHD8Q9HCK8 2581 aa17.63■□□□□ 0.41
VIM-205ENST00000485947 TMEM191CA6NGB0 347 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 SGK1O00141 431 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 MYO1FO00160 1098 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 TIMM44O43615 452 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 ADAM23O75077 832 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 LTFP02788 710 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 LCP1P13796 627 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 MAN1A1P33908 653 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 SLC1A1P43005 524 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 SLC6A3Q01959 620 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms