RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 CNGA3Q16281 694 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 FAM110CQ1W6H9 321 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 ARL13BQ3SXY8 428 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 SLC9C1Q4G0N8 1177 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 TMEM196Q5HYL7 178 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 HIBCHQ6NVY1 386 aaPredicted RBP5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 UBE2Q1Q7Z7E8 422 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 C11orf96Q7Z7L8 435 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 DPP9Q86TI2 863 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 CCDC136Q96JN2 1154 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 GDF15Q99988 308 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 TMEM8AQ9HCN3 771 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 TMEM184CQ9NVA4 438 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 VPS4AQ9UN37 437 aa5.34□□□□□ -1.55
SMARCC1-207ENST00000485833 RGPD3A6NKT7 1758 aaPredicted RBP5.34□□□□□ -1.56
SMARCC1-207ENST00000485833 RGPD4Q7Z3J3 1758 aa5.34□□□□□ -1.56
SMARCC1-207ENST00000485833 NRXN1Q9ULB1 1477 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 VPS8Q8N3P4 1428 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 KIF1BO60333 1816 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 ANO9A1A5B4 782 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 RASA4BC9J798 803 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 ZSCAN9O15535 394 aaPredicted RBP5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 RASA4O43374 803 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 TLR2O60603 784 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 HARSP12081 509 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 PRF1P14222 555 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 PECAM1P16284 738 aaPredicted RBP5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 TNFSF4P23510 183 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 DUSP1P28562 367 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 IGHMBP2P38935 993 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 TM4SF4P48230 202 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 CCT4P50991 539 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 SLC35G1Q2M3R5 365 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 ARHGAP15Q53QZ3 475 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 ANKRD13BQ86YJ7 626 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 TXLNBQ8N3L3 684 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 NRACQ8N912 160 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 C9orf106Q8NAJ2 232 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 IGFBPL1Q8WX77 278 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 BRI3BPQ8WY22 251 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 OVCA2Q8WZ82 227 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 ZBTB9Q96C00 473 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 GRAMD1AQ96CP6 724 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 NAF1Q96HR8 494 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 FCRL5Q96RD9 977 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 TM2D2Q9BX73 214 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 GEMIN8Q9NWZ8 242 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 RGL1Q9NZL6 768 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 SIRT4Q9Y6E7 314 aaPredicted RBP5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 KNDC1Q76NI1 1749 aa5.33□□□□□ -1.56
SMARCC1-207ENST00000485833 RRBP1Q9P2E9 1410 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 FAM234BA2RU67 622 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 C16orf96A6NNT2 1141 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 NCK2O43639 380 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 PLAUP00749 431 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 VIPP01282 170 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 SLC3A2P08195 630 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 TMEM191BP0C7N4 346 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 CYP19A1P11511 503 aaPredicted RBP5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 MMP8P22894 467 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 SRSF1Q07955 248 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 NSUN2Q08J23 767 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 TRIM71Q2Q1W2 868 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 FAM209BQ5JX69 171 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 KSR2Q6VAB6 950 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 TFAP2DQ7Z6R9 452 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 PIP4P1Q86T03 277 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 GLIS1Q8NBF1 620 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 AKAP1Q92667 903 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 P2RY11Q96G91 374 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 NUDT22Q9BRQ3 303 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 AGO4Q9HCK5 861 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 HEMK1Q9Y5R4 338 aaPredicted RBP5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 LRRC37A3O60309 1634 aa5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 PHRF1Q9P1Y6 1649 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-207ENST00000485833 LRPPRCP42704 1394 aaKnown RBP5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 LY6G6EA0A0G2JKS1 128 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 C2CD4BA6NLJ0 364 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 TTC34A8MYJ7 566 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 USP12O75317 370 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 FGF18O76093 207 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 CD63P08962 238 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 GSTM5P46439 218 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 VPS41P49754 854 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 SEMA3BQ13214 749 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 STIM1Q13586 685 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 MAPKAPK3Q16644 382 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 LONRF1Q17RB8 773 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 HSP90AB2PQ58FF8 381 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 AWAT2Q6E213 333 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 CCDC144NLQ6NUI1 221 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 TECPR1Q7Z6L1 1165 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 OR2C3Q8N628 320 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 OR52L2PQ8NGH6 319 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 RIPOR3Q96MK2 946 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 SENP7Q9BQF6 1050 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.31□□□□□ -1.566e-7■■□□□ 12
SMARCC1-207ENST00000485833 MLXIPLQ9NP71 852 aa5.31□□□□□ -1.56
SMARCC1-207ENST00000485833 ASNSD1Q9NWL6 643 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms