RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 WASP42768 502 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 MLLT6P55198 1093 aaPredicted RBP12.26□□□□□ -0.45
APTX-227ENST00000485479 TAS2R40P59535 323 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 GRSF1Q12849 480 aaKnown RBP eCLIP12.26□□□□□ -0.45
APTX-227ENST00000485479 CDH18Q13634 790 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 PPP6R3Q5H9R7 873 aaPredicted RBP12.26□□□□□ -0.45
APTX-227ENST00000485479 TMEM31Q5JXX7 168 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 TMEM215Q68D42 235 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 ZNF683Q8IZ20 524 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 CCAR2Q8N163 923 aaKnown RBP12.26□□□□□ -0.45
APTX-227ENST00000485479 HJURPQ8NCD3 748 aaPredicted RBP12.26□□□□□ -0.45
APTX-227ENST00000485479 FNIP1Q8TF40 1166 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 RFFLQ8WZ73 363 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 PNKPQ96T60 521 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 DHX35Q9H5Z1 703 aaKnown RBP12.26□□□□□ -0.45
APTX-227ENST00000485479 HCN2Q9UL51 889 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 FZD10Q9ULW2 581 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 AP4E1Q9UPM8 1137 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 MACROD2A1Z1Q3 448 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 MAN2B1O00754 1011 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 PRPSAP2O60256 369 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 RNF8O76064 485 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 LRIG2O94898 1065 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 CISD3P0C7P0 127 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 AOC1P19801 751 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 TIE1P35590 1138 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 ARL13BQ3SXY8 428 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 GRAMD4Q6IC98 578 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 KIAA1328Q86T90 577 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 FBXL6Q8N531 539 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 CCDC33Q8N5R6 958 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 TERB1Q8NA31 727 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 RPLP0P6Q8NHW5 317 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 CYB5D2Q8WUJ1 264 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 AZIN2Q96A70 460 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 XPO6Q96QU8 1125 aaKnown RBP12.25□□□□□ -0.45
APTX-227ENST00000485479 ACOX2Q99424 681 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 LRFN3Q9BTN0 628 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 CIPCQ9C0C6 399 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 KCNF1Q9H3M0 494 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 UVRAGQ9P2Y5 699 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 IP6K2Q9UHH9 426 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 NEU3Q9UQ49 428 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 DOCK4Q8N1I0 1966 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 KMT2EQ8IZD2 1858 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 WASH3PC4AMC7 463 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 LUC7L3O95232 432 aaKnown RBP12.25□□□□□ -0.45
APTX-227ENST00000485479 IPO7O95373 1038 aaKnown RBP12.25□□□□□ -0.45
APTX-227ENST00000485479 PTMAP06454 111 aaKnown RBP12.25□□□□□ -0.45
APTX-227ENST00000485479 MZF1P28698 734 aaPredicted RBP12.25□□□□□ -0.45
APTX-227ENST00000485479 SLC25A11Q02978 314 aaKnown RBP12.25□□□□□ -0.45
APTX-227ENST00000485479 LMAN2Q12907 356 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 EFHC2Q5JST6 749 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 APCDD1Q8J025 514 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 ZNF366Q8N895 744 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 KIAA1958Q8N8K9 716 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 HAPLN3Q96S86 360 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 KCTD15Q96SI1 283 aaPredicted RBP12.25□□□□□ -0.45
APTX-227ENST00000485479 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.25□□□□□ -0.45
APTX-227ENST00000485479 DNAI1Q9UI46 699 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 PAXBP1Q9Y5B6 917 aa12.25□□□□□ -0.45
APTX-227ENST00000485479 FRYLO94915 3013 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 CACNA1IQ9P0X4 2223 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 TYW5A2RUC4 315 aaKnown RBP12.24□□□□□ -0.45
APTX-227ENST00000485479 BUB1BO60566 1050 aaPredicted RBP12.24□□□□□ -0.45
APTX-227ENST00000485479 APODP05090 189 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 CD48P09326 243 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 RARAP10276 462 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 CSKP41240 450 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 CTSOP43234 321 aaPredicted RBP12.24□□□□□ -0.45
APTX-227ENST00000485479 NAP1L1P55209 391 aaKnown RBP12.24□□□□□ -0.45
APTX-227ENST00000485479 AMPD2Q01433 879 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 MTAPQ13126 283 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 PIGHQ14442 188 aaPredicted RBP12.24□□□□□ -0.45
APTX-227ENST00000485479 LLGL1Q15334 1064 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 FUT11Q495W5 492 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 EGFLAMQ63HQ2 1017 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 CXorf57Q6NSI4 855 aaKnown RBP12.24□□□□□ -0.45
APTX-227ENST00000485479 TSSK4Q6SA08 328 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 SUGP1Q8IWZ8 645 aaKnown RBP12.24□□□□□ -0.45
APTX-227ENST00000485479 ANP32BQ92688 251 aaKnown RBP12.24□□□□□ -0.45
APTX-227ENST00000485479 DDX50Q9BQ39 737 aaKnown RBP12.24□□□□□ -0.45
APTX-227ENST00000485479 DLGAP2Q9P1A6 1054 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 GGA2Q9UJY4 613 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 INTS6Q9UL03 887 aaKnown RBP12.24□□□□□ -0.45
APTX-227ENST00000485479 MRPS17Q9Y2R5 130 aaKnown RBP12.24□□□□□ -0.45
APTX-227ENST00000485479 MFHAS1Q9Y4C4 1052 aa12.24□□□□□ -0.45
APTX-227ENST00000485479 A0A0D9SEW6 157 aa12.23□□□□□ -0.45
APTX-227ENST00000485479 A0A1B0GVM2 712 aa12.23□□□□□ -0.45
APTX-227ENST00000485479 TCAF2A6NFQ2 919 aa12.23□□□□□ -0.45
APTX-227ENST00000485479 PRR33A8MZF0 331 aa12.23□□□□□ -0.45
APTX-227ENST00000485479 GPR37L1O60883 481 aa12.23□□□□□ -0.45
APTX-227ENST00000485479 PROSCO94903 275 aa12.23□□□□□ -0.45
APTX-227ENST00000485479 GOT1P17174 413 aa12.23□□□□□ -0.45
APTX-227ENST00000485479 DESP17661 470 aa12.23□□□□□ -0.45
APTX-227ENST00000485479 EPHB2P29323 1055 aa12.23□□□□□ -0.45
APTX-227ENST00000485479 GRIA2P42262 883 aa12.23□□□□□ -0.45
APTX-227ENST00000485479 VAV2P52735 878 aa12.23□□□□□ -0.45
APTX-227ENST00000485479 RABGAP1LQ5R372 815 aa12.23□□□□□ -0.45
APTX-227ENST00000485479 ERMARDQ5T6L9 678 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms