RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 CMTR2Q8IYT2 770 aaKnown RBP17.19■□□□□ 0.34
CTSA-207ENST00000484855 SLC39A13Q96H72 371 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 CATSPERBQ9H7T0 1116 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 MAGED2Q9UNF1 606 aaPredicted RBP17.19■□□□□ 0.34
CTSA-207ENST00000484855 HS3ST4Q9Y661 456 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 MRPL42Q9Y6G3 142 aaKnown RBP17.19■□□□□ 0.34
CTSA-207ENST00000484855 AVILO75366 819 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 APOEP02649 317 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 TSHRP16473 764 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 SSTR1P30872 391 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 GARSP41250 739 aaKnown RBP17.18■□□□□ 0.34
CTSA-207ENST00000484855 TUFMP49411 452 aaKnown RBP17.18■□□□□ 0.34
CTSA-207ENST00000484855 LBX1P52954 281 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 GUCY1A3Q02108 690 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 C10orf120Q5SQS8 335 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 TAOK1Q7L7X3 1001 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 ZNF567Q8N184 647 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 RIBC1Q8N443 379 aaPredicted RBP17.18■□□□□ 0.34
CTSA-207ENST00000484855 CELF6Q96J87 481 aaKnown RBP17.18■□□□□ 0.34
CTSA-207ENST00000484855 CLSTN3Q9BQT9 956 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 HERC2P3Q9BVR0 1158 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 PCDH10Q9P2E7 1040 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 AFF4Q9UHB7 1163 aaKnown RBP17.18■□□□□ 0.34
CTSA-207ENST00000484855 LGALS13Q9UHV8 139 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 SLC12A6Q9UHW9 1150 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 TEX264Q9Y6I9 313 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 NYNRINQ9P2P1 1898 aaKnown RBP17.18■□□□□ 0.34
CTSA-207ENST00000484855 E9PAM4 449 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 F5H423 210 aaPredicted RBP17.18■□□□□ 0.34
CTSA-207ENST00000484855 KCNK1O00180 336 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 TBX18O95935 607 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 ATP2A2P16615 1042 aaKnown RBP17.18■□□□□ 0.34
CTSA-207ENST00000484855 MDH1P40925 334 aaKnown RBP17.18■□□□□ 0.34
CTSA-207ENST00000484855 NRG1Q02297 640 aaPredicted RBP17.18■□□□□ 0.34
CTSA-207ENST00000484855 CBLBQ13191 982 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 CAND1Q86VP6 1230 aaKnown RBP17.18■□□□□ 0.34
CTSA-207ENST00000484855 DNAJC5GQ8N7S2 189 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 DEPDC1BQ8WUY9 529 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 CEP295NLQ96MC4 621 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 TTLL2Q9BWV7 592 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 CNOT10Q9H9A5 744 aaKnown RBP17.18■□□□□ 0.34
CTSA-207ENST00000484855 MARCH2Q9P0N8 246 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 KLHL8Q9P2G9 620 aaPredicted RBP17.18■□□□□ 0.34
CTSA-207ENST00000484855 TBK1Q9UHD2 729 aa17.18■□□□□ 0.34
CTSA-207ENST00000484855 POC1B-GALNT4F8VUJ3 575 aa17.17■□□□□ 0.34
CTSA-207ENST00000484855 MTSS1O43312 755 aa17.17■□□□□ 0.34
CTSA-207ENST00000484855 PTPN3P26045 913 aa17.17■□□□□ 0.34
CTSA-207ENST00000484855 IRAK1P51617 712 aa17.17■□□□□ 0.34
CTSA-207ENST00000484855 DSG1Q02413 1049 aa17.17■□□□□ 0.34
CTSA-207ENST00000484855 PPARDQ03181 441 aa17.17■□□□□ 0.34
CTSA-207ENST00000484855 TRIP4Q15650 581 aaPredicted RBP17.17■□□□□ 0.34
CTSA-207ENST00000484855 PIK3R6Q5UE93 754 aa17.17■□□□□ 0.34
CTSA-207ENST00000484855 C3orf62Q6ZUJ4 267 aa17.17■□□□□ 0.34
CTSA-207ENST00000484855 MIB1Q86YT6 1006 aa17.17■□□□□ 0.34
CTSA-207ENST00000484855 ARHGEF2Q92974 986 aaKnown RBP17.17■□□□□ 0.34
CTSA-207ENST00000484855 SELENOSQ9BQE4 189 aa17.17■□□□□ 0.34
CTSA-207ENST00000484855 TMEM106CQ9BVX2 250 aa17.17■□□□□ 0.34
CTSA-207ENST00000484855 BAIAP3O94812 1187 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 ZDHHC11BP0C7U3 371 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 PSMB4P28070 264 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 GCAP28676 217 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 MMP13P45452 471 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 COG7P83436 770 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 TMED2Q15363 201 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 LEKR1Q6ZMV7 388 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 ZNF534Q76KX8 674 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 IGDCC3Q8IVU1 814 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 ATP6V0D2Q8N8Y2 350 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 C1orf74Q96LT6 269 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 YME1L1Q96TA2 773 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 PPCSQ9HAB8 311 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 SPG21Q9NZD8 308 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 TUBP50607 506 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 SARNPP82979 210 aaKnown RBP17.16■□□□□ 0.34
CTSA-207ENST00000484855 PARP6Q2NL67 630 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 PID1Q7Z2X4 250 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 C14orf80Q86SX3 495 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 EXOC3L1Q86VI1 746 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 TDRPQ86YL5 185 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 AGGF1Q8N302 714 aaeCLIP17.16■□□□□ 0.34
CTSA-207ENST00000484855 LZTR1Q8N653 840 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 FBF1Q8TES7 1133 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 UBE2OQ9C0C9 1292 aaKnown RBP17.16■□□□□ 0.34
CTSA-207ENST00000484855 CCSER2Q9H7U1 834 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 XAB2Q9HCS7 855 aaKnown RBP17.16■□□□□ 0.34
CTSA-207ENST00000484855 EIF2B3Q9NR50 452 aaKnown RBP17.16■□□□□ 0.34
CTSA-207ENST00000484855 EURLQ9NYK6 297 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 IGSF9Q9P2J2 1179 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 RABGEF1Q9UJ41 708 aa17.16■□□□□ 0.34
CTSA-207ENST00000484855 SLC12A8A0AV02 714 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 CARNS1A5YM72 827 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 DFFAO00273 331 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 TLR5O60602 858 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 SEC24AO95486 1093 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 URODP06132 367 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 MAGEA3P43357 314 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 MLLT6P55198 1093 aaPredicted RBP17.15■□□□□ 0.34
CTSA-207ENST00000484855 C1QTNF8P60827 252 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 CDK16Q00536 496 aa17.15■□□□□ 0.34
CTSA-207ENST00000484855 DMTNQ08495 405 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms