RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 EDEM1Q92611 657 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 ZNF578Q96N58 590 aaPredicted RBP11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 OMDQ99983 421 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 BACH2Q9BYV9 841 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 ULBP1Q9BZM6 244 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 CUEDC2Q9H467 287 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 ERVMER34-1Q9H9K5 563 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 CYP3A43Q9HB55 503 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 INTS6Q9UL03 887 aaKnown RBP11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 FZD4Q9ULV1 537 aa11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 MORC2Q9Y6X9 1032 aaPredicted RBP11.31□□□□□ -0.6
SMARCC1-205ENST00000483847 TTC34A8MYJ7 566 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 KLK10O43240 276 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 TBL1XO60907 577 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 RNASEH1O60930 286 aaKnown RBP11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 ZBED1O96006 694 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 SLC6A4P31645 630 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 CSKP41240 450 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 CTSOP43234 321 aaPredicted RBP11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 PSMD8P48556 350 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 UCNP55089 124 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 GABREP78334 506 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 CUL4BQ13620 913 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 PM20D1Q6GTS8 502 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 LURAP1LQ8IV03 231 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 SLC25A45Q8N413 288 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 MFSD2AQ8NA29 543 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 TMC2Q8TDI7 906 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 KCNE4Q8WWG9 221 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 TTC17Q96AE7 1141 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 MYEOVQ96EZ4 313 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 HEXIM2Q96MH2 286 aaKnown RBP11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 FAM129BQ96TA1 746 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 NIF3L1Q9GZT8 377 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 STIM2Q9P246 746 aa11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 HBS1LQ9Y450 684 aaKnown RBP11.3□□□□□ -0.6
SMARCC1-205ENST00000483847 DOCK9Q9BZ29 2069 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 YJEFN3A6XGL0 299 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 E7ENQ6 273 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 LATO43561 262 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 USP12O75317 370 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 TRIM49P0CI25 452 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 TRIM49CP0CI26 452 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 MYF5P13349 255 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 GOT1P17174 413 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 SYT1P21579 422 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 GCLMP48507 274 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 NASPP49321 788 aaPredicted RBP11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 METAP1P53582 386 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 ZNF445P59923 1031 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 ST8SIA6P61647 398 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 E2F1Q01094 437 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 SRSF1Q07955 248 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 PPP3CAQ08209 521 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 VAC14Q08AM6 782 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 SLC45A4Q5BKX6 768 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 FAM133BQ5BKY9 247 aaKnown RBP11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 PIK3R6Q5UE93 754 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 CDCP2Q5VXM1 449 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 KIAA1614Q5VZ46 1190 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 NAPEPLDQ6IQ20 393 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 SHC4Q6S5L8 630 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 MMS22LQ6ZRQ5 1243 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 SLC9A9Q8IVB4 645 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 GRAMD1CQ8IYS0 662 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 OXR1Q8N573 874 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 IQUBQ8NA54 791 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 SLC4A11Q8NBS3 891 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 KIAA0895Q8NCT3 520 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 OR14C36Q8NHC7 312 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 GOLGA5Q8TBA6 731 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 SNRNP27Q8WVK2 155 aaKnown RBP11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 MED8Q96G25 268 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 PRICKLE1Q96MT3 831 aaPredicted RBP11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 UBXN6Q9BZV1 441 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 KCTD10Q9H3F6 313 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 ASCL3Q9NQ33 180 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 UCKL1Q9NWZ5 548 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 ARHGAP20Q9P2F6 1191 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 SLCO3A1Q9UIG8 710 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 CA5BQ9Y2D0 317 aa11.29□□□□□ -0.6
SMARCC1-205ENST00000483847 TEX15Q9BXT5 2789 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 TBC1D3DA0A087WVF3 549 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 TBC1D3IA0A087WXS9 549 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 TBC1D3EA0A087X179 549 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 TBC1D3KA0A087X1G2 549 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 A0A1B0GVM2 712 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 TBC1D3FA6NER0 549 aaPredicted RBP11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 TBC1D3LB9A6J9 549 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 IKBKBO14920 756 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 OPA1O60313 960 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 DXOO77932 396 aaKnown RBP11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 LATS1O95835 1130 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 NR3C1P04150 777 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 SLFN14P0C7P3 912 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 TBC1D3HP0C7X1 549 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 MAT2AP31153 395 aaKnown RBP11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 DRD3P35462 400 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms