RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 LGI2Q8N0V4 545 aa18.68■□□□□ 0.58
ATG4B-221ENST00000483778 HJURPQ8NCD3 748 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-221ENST00000483778 SNX19Q92543 992 aa18.68■□□□□ 0.58
ATG4B-221ENST00000483778 BIRC7Q96CA5 298 aa18.68■□□□□ 0.58
ATG4B-221ENST00000483778 GAREM1Q9H706 876 aa18.68■□□□□ 0.58
ATG4B-221ENST00000483778 SERGEFQ9UGK8 458 aa18.68■□□□□ 0.58
ATG4B-221ENST00000483778 SLCO3A1Q9UIG8 710 aa18.68■□□□□ 0.58
ATG4B-221ENST00000483778 WDFY3Q8IZQ1 3526 aa18.68■□□□□ 0.58
ATG4B-221ENST00000483778 DSPP15924 2871 aaKnown RBP18.67■□□□□ 0.58
ATG4B-221ENST00000483778 IRAK2O43187 625 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 THAP12O43422 761 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 SIN3BO75182 1162 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 GNA14O95837 355 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 ATP5BP06576 529 aaKnown RBP18.67■□□□□ 0.58
ATG4B-221ENST00000483778 SLC14A1Q13336 389 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 E2F5Q15329 346 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 ARHGAP44Q17R89 818 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 RAP1GAP2Q684P5 730 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 RAB44Q7Z6P3 723 aaPredicted RBP18.67■□□□□ 0.58
ATG4B-221ENST00000483778 CREBRFQ8IUR6 639 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 NAXDQ8IW45 347 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 DHX40Q8IX18 779 aaKnown RBP18.67■□□□□ 0.58
ATG4B-221ENST00000483778 GOLGA1Q92805 767 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 ORAI3Q9BRQ5 295 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 SUN2Q9UH99 717 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.67■□□□□ 0.58
ATG4B-221ENST00000483778 NEUROG3Q9Y4Z2 214 aa18.67■□□□□ 0.58
ATG4B-221ENST00000483778 TTC34A8MYJ7 566 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 SEMA4FO95754 770 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 IGLV3-25P01717 112 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 EIF4EBP2Q13542 120 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-221ENST00000483778 KIF19Q2TAC6 998 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 PITRM1Q5JRX3 1037 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 C9orf64Q5T6V5 341 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 TRIM65Q6PJ69 517 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 CIR1Q86X95 450 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-221ENST00000483778 STK32AQ8WU08 396 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 SERPINB11Q96P15 392 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 FAM129BQ96TA1 746 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 IRX2Q9BZI1 471 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-221ENST00000483778 ZDHHC5Q9C0B5 715 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 RSPH9Q9H1X1 276 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-221ENST00000483778 TM9SF3Q9HD45 589 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 KIAA1468Q9P260 1216 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 ERVW-1Q9UQF0 538 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 MSRB2Q9Y3D2 182 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 SNX11Q9Y5W9 270 aa18.66■□□□□ 0.58
ATG4B-221ENST00000483778 PKD1L2Q7Z442 2459 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 FSBPO95073 299 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 TRUB2O95900 331 aaKnown RBP18.65■□□□□ 0.58
ATG4B-221ENST00000483778 TACR2P21452 398 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 GNA15P30679 374 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 USP8P40818 1118 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 ACADSBP45954 432 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 YWHAZP63104 245 aaKnown RBP18.65■□□□□ 0.58
ATG4B-221ENST00000483778 NNTQ13423 1086 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 RPL10LQ96L21 214 aaKnown RBP18.65■□□□□ 0.58
ATG4B-221ENST00000483778 CPXM1Q96SM3 734 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 EBF2Q9HAK2 575 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 SIX2Q9NPC8 291 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 TM7SF3Q9NS93 570 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 RWDD2AQ9UIY3 292 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 PCOLCE2Q9UKZ9 415 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 BTBD3Q9Y2F9 522 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 ZFYVE26Q68DK2 2539 aa18.65■□□□□ 0.58
ATG4B-221ENST00000483778 FAM221BA6H8Z2 402 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 CAPN9O14815 690 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 GRAP2O75791 330 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 LUC7L3O95232 432 aaKnown RBP18.64■□□□□ 0.57
ATG4B-221ENST00000483778 DNTTP04053 509 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 CAPNS1P04632 268 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 IGHV4-34P06331 123 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 FTH1P19P0C7X4 201 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 PNMA6AP0CW24 399 aaPredicted RBP18.64■□□□□ 0.57
ATG4B-221ENST00000483778 PON1P27169 355 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 MATKP42679 507 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 STK19P49842 368 aaPredicted RBP18.64■□□□□ 0.57
ATG4B-221ENST00000483778 IRAK1P51617 712 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 HNRNPA1L2Q32P51 320 aaKnown RBP18.64■□□□□ 0.57
ATG4B-221ENST00000483778 ZNF776Q68DI1 518 aaPredicted RBP18.64■□□□□ 0.57
ATG4B-221ENST00000483778 DBX2Q6ZNG2 339 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 BEND5Q7L4P6 421 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 PASD1Q8IV76 773 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 SETD7Q8WTS6 366 aaKnown RBP18.64■□□□□ 0.57
ATG4B-221ENST00000483778 PRMT1Q99873 361 aaKnown RBP18.64■□□□□ 0.57
ATG4B-221ENST00000483778 BTBD1Q9H0C5 482 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 PCED1AQ9H1Q7 454 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 NEUROG2Q9H2A3 272 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 PABPC3Q9H361 631 aaKnown RBP18.64■□□□□ 0.57
ATG4B-221ENST00000483778 THAP9Q9H5L6 903 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 POPDC2Q9HBU9 364 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 PCDHB9Q9Y5E1 797 aa18.64■□□□□ 0.57
ATG4B-221ENST00000483778 SYNJ2BP-COX16A0A087WUM0 186 aa18.63■□□□□ 0.57
ATG4B-221ENST00000483778 FAM47DPA6NHR8 397 aa18.63■□□□□ 0.57
ATG4B-221ENST00000483778 SRRM3A6NNA2 597 aaPredicted RBP18.63■□□□□ 0.57
ATG4B-221ENST00000483778 KCNU1A8MYU2 1149 aa18.63■□□□□ 0.57
ATG4B-221ENST00000483778 TAF4O00268 1085 aa18.63■□□□□ 0.57
ATG4B-221ENST00000483778 MID1O15344 667 aa18.63■□□□□ 0.57
ATG4B-221ENST00000483778 MED7O43513 233 aa18.63■□□□□ 0.57
ATG4B-221ENST00000483778 VAV1P15498 845 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms