RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CLP1Q92989 425 aaKnown RBP14.45□□□□□ -0.1
CLK3-204ENST00000483723 SERPINB12Q96P63 405 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 TSGA13Q96PP4 275 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 CDK5RAP1Q96SZ6 601 aaKnown RBP14.45□□□□□ -0.1
CLK3-204ENST00000483723 CATSPERBQ9H7T0 1116 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 PCDHB12Q9Y5F1 795 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 DOCK4Q8N1I0 1966 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 IGLV3-10A0A075B6K4 115 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 E9PAM4 449 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 GOLGA8MH3BSY2 632 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 RASGRF2O14827 1237 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 MTSS1O43312 755 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 SRGAP2BP0DMP2 458 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 GARSP41250 739 aaKnown RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 SKOR1P84550 965 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 FPGSQ05932 587 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 AP1B1Q10567 949 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 MTA1Q13330 715 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 C10orf120Q5SQS8 335 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 AFMIDQ63HM1 303 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 ARHGAP12Q8IWW6 846 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 CCDC13Q8IYE1 715 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 TCEAL8Q8IYN2 117 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 PDIK1LQ8N165 341 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 FIBCD1Q8N539 461 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 TAB3Q8N5C8 712 aaPredicted RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 SH2D3CQ8N5H7 860 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 UHMK1Q8TAS1 419 aaKnown RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 ZSCAN18Q8TBC5 510 aaPredicted RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 SP7Q8TDD2 431 aaPredicted RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 TRMT2BQ96GJ1 504 aaKnown RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 FERMT1Q9BQL6 677 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 WDR83Q9BRX9 315 aaKnown RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 IGSF9Q9P2J2 1179 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 PPARGC1AQ9UBK2 798 aaKnown RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 SLC12A6Q9UHW9 1150 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 HBS1LQ9Y450 684 aaKnown RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 NR2E3Q9Y5X4 410 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 A0A087WUV0 522 aaPredicted RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 ZNF840PA6NDX5 716 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 RNF103O00237 685 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 TLR5O60602 858 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 STK10O94804 968 aaKnown RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 APOEP02649 317 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 CTSAP10619 480 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 MAGEA3P43357 314 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 TUBP50607 506 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 CDK16Q00536 496 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 MLLT1Q03111 559 aaPredicted RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 AUHQ13825 339 aaKnown RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 PARP6Q2NL67 630 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 MS4A13Q5J8X5 152 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 FAM182AQ5T1J6 154 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 KDM7AQ6ZMT4 941 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 ARHGEF18Q6ZSZ5 1173 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 CAND1Q86VP6 1230 aaKnown RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 ZBED8Q8IZ13 594 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 ZNF567Q8N184 647 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 CCNYQ8ND76 341 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 BTN2A3PQ96KV6 586 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 PRMT1Q99873 361 aaKnown RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 ZBP1Q9H171 429 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 CCSER2Q9H7U1 834 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 CYP4F11Q9HBI6 524 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 EIF2B3Q9NR50 452 aaKnown RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 MRPL17Q9NRX2 175 aaKnown RBP14.44□□□□□ -0.1
CLK3-204ENST00000483723 PCDH10Q9P2E7 1040 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 SSX2IPQ9Y2D8 614 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 YIPF1Q9Y548 306 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 INSL6Q9Y581 213 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 TEX264Q9Y6I9 313 aa14.44□□□□□ -0.1
CLK3-204ENST00000483723 CLUHO75153 1309 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 SLC12A8A0AV02 714 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 DRGXA6NNA5 263 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 E7EVH7 732 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 FGF18O76093 207 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 CCNCP24863 283 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 PTPN3P26045 913 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 ALDH1A3P47895 512 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 GPX6P59796 221 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 COG7P83436 770 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 CREMQ03060 361 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 FAXCQ5TGI0 409 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 RWDD4Q6NW29 188 aaKnown RBP14.43□□□□□ -0.1
CLK3-204ENST00000483723 TADA2BQ86TJ2 420 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 NLRP14Q86W24 1093 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 RTL3Q8N8U3 475 aaKnown RBP14.43□□□□□ -0.1
CLK3-204ENST00000483723 EPS8L3Q8TE67 593 aaKnown RBP14.43□□□□□ -0.1
CLK3-204ENST00000483723 PYROXD1Q8WU10 500 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 HERVK_113Q902F9 699 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 VAT1Q99536 393 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 CCDC77Q9BR77 488 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 EURLQ9NYK6 297 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 CXXC1Q9P0U4 656 aaPredicted RBP14.43□□□□□ -0.1
CLK3-204ENST00000483723 PRKAG2Q9UGJ0 569 aa14.43□□□□□ -0.1
CLK3-204ENST00000483723 MAGED2Q9UNF1 606 aaPredicted RBP14.43□□□□□ -0.1
CLK3-204ENST00000483723 NOVA2Q9UNW9 492 aaKnown RBP14.43□□□□□ -0.1
CLK3-204ENST00000483723 ZBBXA8MT70 800 aa14.42□□□□□ -0.1
CLK3-204ENST00000483723 TEX28O15482 410 aa14.42□□□□□ -0.1
CLK3-204ENST00000483723 BANF1O75531 89 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms